Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
FOXA2Q9Y261 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 AL512361.1-201ENST00000554200 418 ntBASIC12.46□□□□□ -0.41
FOXA2Q9Y261 AC010336.2-201ENST00000564226 506 ntBASIC12.46□□□□□ -0.41
FOXA2Q9Y261 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
FOXA2Q9Y261 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
FOXA2Q9Y261 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
FOXA2Q9Y261 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
FOXA2Q9Y261 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
FOXA2Q9Y261 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.46□□□□□ -0.42
FOXA2Q9Y261 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.46□□□□□ -0.42
FOXA2Q9Y261 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.46□□□□□ -0.42
FOXA2Q9Y261 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
FOXA2Q9Y261 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
FOXA2Q9Y261 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
FOXA2Q9Y261 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
FOXA2Q9Y261 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 AC026748.1-201ENST00000624349 3251 ntBASIC12.45□□□□□ -0.42
FOXA2Q9Y261 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 AL133267.1-201ENST00000398220 340 ntBASIC12.45□□□□□ -0.42
FOXA2Q9Y261 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.45□□□□□ -0.42
FOXA2Q9Y261 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 INGX-202ENST00000489074 768 ntBASIC12.45□□□□□ -0.42
FOXA2Q9Y261 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 ZNF890P-202ENST00000530367 1156 ntBASIC12.45□□□□□ -0.42
FOXA2Q9Y261 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 AL390955.2-201ENST00000603032 514 ntBASIC12.45□□□□□ -0.42
FOXA2Q9Y261 AL844908.2-201ENST00000609461 460 ntBASIC12.45□□□□□ -0.42
FOXA2Q9Y261 AL645728.2-202ENST00000641679 227 ntBASIC12.45□□□□□ -0.42
FOXA2Q9Y261 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
FOXA2Q9Y261 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms