Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.15■□□□□ 0.02
MKS1Q9NXB0 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.15■□□□□ 0.02
MKS1Q9NXB0 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.15■□□□□ 0.02
MKS1Q9NXB0 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
MKS1Q9NXB0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MKS1Q9NXB0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MKS1Q9NXB0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.15■□□□□ 0.02
MKS1Q9NXB0 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MKS1Q9NXB0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MKS1Q9NXB0 FDX1P1-201ENST00000449115 551 ntBASIC15.15■□□□□ 0.02
MKS1Q9NXB0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.15■□□□□ 0.02
MKS1Q9NXB0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.15■□□□□ 0.02
MKS1Q9NXB0 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.15■□□□□ 0.02
MKS1Q9NXB0 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MKS1Q9NXB0 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.15■□□□□ 0.02
MKS1Q9NXB0 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MKS1Q9NXB0 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MKS1Q9NXB0 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
MKS1Q9NXB0 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MKS1Q9NXB0 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.15■□□□□ 0.02
MKS1Q9NXB0 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MKS1Q9NXB0 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MKS1Q9NXB0 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MKS1Q9NXB0 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MKS1Q9NXB0 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.15■□□□□ 0.02
MKS1Q9NXB0 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
MKS1Q9NXB0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
MKS1Q9NXB0 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MKS1Q9NXB0 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
MKS1Q9NXB0 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MKS1Q9NXB0 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 RBPMS2P1-201ENST00000437762 623 ntBASIC15.14■□□□□ 0.01
MKS1Q9NXB0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 PGAM5P1-201ENST00000518923 814 ntBASIC15.14■□□□□ 0.01
MKS1Q9NXB0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 MTDHP5-201ENST00000598980 586 ntBASIC15.14■□□□□ 0.01
MKS1Q9NXB0 LINC01115-203ENST00000606068 577 ntBASIC15.14■□□□□ 0.01
MKS1Q9NXB0 AC074044.1-201ENST00000609673 707 ntBASIC15.14■□□□□ 0.01
MKS1Q9NXB0 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 SLC9A3P3-201ENST00000457608 2229 ntBASIC15.14■□□□□ 0.01
MKS1Q9NXB0 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MKS1Q9NXB0 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.13■□□□□ 0.01
MKS1Q9NXB0 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms