Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 AP001099.1-201ENST00000579385 855 ntTSL 5 BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 MPDU1-223ENST00000582151 728 ntBASIC18.36■□□□□ 0.53
RTN4Q9NQC3 NKAPP1-205ENST00000585790 367 ntBASIC18.36■□□□□ 0.53
RTN4Q9NQC3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.36■□□□□ 0.53
RTN4Q9NQC3 AC027644.3-201ENST00000607978 557 ntBASIC18.36■□□□□ 0.53
RTN4Q9NQC3 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 AL157762.1-201ENST00000619612 415 ntBASIC18.36■□□□□ 0.53
RTN4Q9NQC3 AC016542.2-201ENST00000624201 619 ntBASIC18.36■□□□□ 0.53
RTN4Q9NQC3 AC002310.6-201ENST00000624451 1377 ntBASIC18.36■□□□□ 0.53
RTN4Q9NQC3 AL022326.1-202ENST00000641533 845 ntBASIC18.36■□□□□ 0.53
RTN4Q9NQC3 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 AC092127.1-201ENST00000567093 3455 ntBASIC18.35■□□□□ 0.53
RTN4Q9NQC3 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 KRT8P39-201ENST00000396270 1433 ntBASIC18.35■□□□□ 0.53
RTN4Q9NQC3 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 AC087388.1-201ENST00000571370 1112 ntBASIC18.35■□□□□ 0.53
RTN4Q9NQC3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 AL139424.1-201ENST00000607572 797 ntBASIC18.35■□□□□ 0.53
RTN4Q9NQC3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTN4Q9NQC3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTN4Q9NQC3 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTN4Q9NQC3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTN4Q9NQC3 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTN4Q9NQC3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC18.34■□□□□ 0.53
RTN4Q9NQC3 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTN4Q9NQC3 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTN4Q9NQC3 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC18.34■□□□□ 0.53
RTN4Q9NQC3 AC007601.1-201ENST00000312019 1974 ntTSL 2 BASIC18.34■□□□□ 0.53
RTN4Q9NQC3 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RTN4Q9NQC3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTN4Q9NQC3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RTN4Q9NQC3 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTN4Q9NQC3 ATP5G2P1-201ENST00000433580 426 ntBASIC18.34■□□□□ 0.53
RTN4Q9NQC3 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RTN4Q9NQC3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTN4Q9NQC3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
RTN4Q9NQC3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RTN4Q9NQC3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
RTN4Q9NQC3 AC092119.3-201ENST00000612618 583 ntBASIC18.34■□□□□ 0.53
RTN4Q9NQC3 REXO1L3P-201ENST00000622202 1288 ntBASIC18.34■□□□□ 0.53
RTN4Q9NQC3 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RTN4Q9NQC3 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RTN4Q9NQC3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTN4Q9NQC3 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC18.34■□□□□ 0.53
RTN4Q9NQC3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTN4Q9NQC3 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RTN4Q9NQC3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RTN4Q9NQC3 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RTN4Q9NQC3 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
RTN4Q9NQC3 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RTN4Q9NQC3 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC18.33■□□□□ 0.53
RTN4Q9NQC3 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
RTN4Q9NQC3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
RTN4Q9NQC3 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
RTN4Q9NQC3 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RTN4Q9NQC3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.33■□□□□ 0.53
RTN4Q9NQC3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.33■□□□□ 0.53
RTN4Q9NQC3 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC18.33■□□□□ 0.53
RTN4Q9NQC3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms