Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.62■□□□□ 0.09
LRRC40Q9H9A6 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 AC093214.1-201ENST00000511688 1107 ntBASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 RFPL4AP1-201ENST00000530883 850 ntBASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 AC104794.3-201ENST00000566840 1248 ntBASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 SAMD11P1-201ENST00000571429 661 ntBASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LRRC40Q9H9A6 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 CLK3P2-201ENST00000427566 1453 ntBASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 AC092183.1-201ENST00000469884 875 ntBASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 RARRES2P5-201ENST00000564013 466 ntBASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LRRC40Q9H9A6 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms