Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
S1PR3Q99500 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
S1PR3Q99500 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
S1PR3Q99500 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
S1PR3Q99500 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
S1PR3Q99500 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
S1PR3Q99500 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
S1PR3Q99500 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
S1PR3Q99500 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
S1PR3Q99500 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
S1PR3Q99500 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.74□□□□□ -0.37
S1PR3Q99500 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
S1PR3Q99500 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
S1PR3Q99500 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
S1PR3Q99500 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
S1PR3Q99500 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
S1PR3Q99500 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
S1PR3Q99500 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.74□□□□□ -0.37
S1PR3Q99500 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
S1PR3Q99500 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.74□□□□□ -0.37
S1PR3Q99500 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.74□□□□□ -0.37
S1PR3Q99500 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.74□□□□□ -0.37
S1PR3Q99500 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
S1PR3Q99500 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
S1PR3Q99500 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
S1PR3Q99500 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
S1PR3Q99500 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
S1PR3Q99500 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
S1PR3Q99500 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
S1PR3Q99500 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
S1PR3Q99500 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
S1PR3Q99500 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
S1PR3Q99500 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
S1PR3Q99500 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
S1PR3Q99500 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
S1PR3Q99500 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
S1PR3Q99500 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
S1PR3Q99500 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
S1PR3Q99500 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
S1PR3Q99500 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
S1PR3Q99500 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.73□□□□□ -0.37
S1PR3Q99500 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
S1PR3Q99500 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
S1PR3Q99500 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.73□□□□□ -0.37
S1PR3Q99500 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.73□□□□□ -0.37
S1PR3Q99500 SDHAP3-202ENST00000515467 728 ntBASIC12.73□□□□□ -0.37
S1PR3Q99500 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
S1PR3Q99500 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.73□□□□□ -0.37
S1PR3Q99500 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
S1PR3Q99500 AC025048.3-201ENST00000590609 569 ntBASIC12.73□□□□□ -0.37
S1PR3Q99500 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.73□□□□□ -0.37
S1PR3Q99500 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.73□□□□□ -0.37
S1PR3Q99500 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
S1PR3Q99500 AC074044.1-201ENST00000609673 707 ntBASIC12.73□□□□□ -0.37
S1PR3Q99500 TEX28P1-201ENST00000613479 1221 ntBASIC12.73□□□□□ -0.37
S1PR3Q99500 TEX28P2-201ENST00000617764 1221 ntBASIC12.73□□□□□ -0.37
S1PR3Q99500 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.73□□□□□ -0.37
S1PR3Q99500 AC005702.4-201ENST00000618393 416 ntBASIC12.73□□□□□ -0.37
S1PR3Q99500 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.73□□□□□ -0.37
S1PR3Q99500 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
S1PR3Q99500 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.73□□□□□ -0.37
S1PR3Q99500 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
S1PR3Q99500 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
S1PR3Q99500 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
S1PR3Q99500 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
S1PR3Q99500 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
S1PR3Q99500 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
S1PR3Q99500 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
S1PR3Q99500 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
S1PR3Q99500 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.73□□□□□ -0.37
S1PR3Q99500 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.73□□□□□ -0.37
S1PR3Q99500 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
S1PR3Q99500 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
S1PR3Q99500 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
S1PR3Q99500 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
S1PR3Q99500 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.73□□□□□ -0.37
S1PR3Q99500 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
S1PR3Q99500 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12.73□□□□□ -0.37
S1PR3Q99500 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.73□□□□□ -0.37
S1PR3Q99500 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
S1PR3Q99500 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
S1PR3Q99500 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
S1PR3Q99500 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
S1PR3Q99500 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
S1PR3Q99500 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
S1PR3Q99500 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
S1PR3Q99500 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
S1PR3Q99500 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
S1PR3Q99500 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
S1PR3Q99500 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
S1PR3Q99500 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.72□□□□□ -0.37
S1PR3Q99500 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
S1PR3Q99500 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.72□□□□□ -0.37
S1PR3Q99500 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
S1PR3Q99500 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
S1PR3Q99500 WASH3P-207ENST00000560956 1394 ntBASIC12.72□□□□□ -0.37
S1PR3Q99500 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
S1PR3Q99500 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
S1PR3Q99500 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
S1PR3Q99500 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms