Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RAB40CQ96S21 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
RAB40CQ96S21 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.52□□□□□ -0.41
RAB40CQ96S21 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB40CQ96S21 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
RAB40CQ96S21 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
RAB40CQ96S21 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB40CQ96S21 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB40CQ96S21 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.52□□□□□ -0.41
RAB40CQ96S21 AC012508.2-201ENST00000567613 1472 ntBASIC12.52□□□□□ -0.41
RAB40CQ96S21 AC018442.1-201ENST00000421439 2061 ntBASIC12.52□□□□□ -0.41
RAB40CQ96S21 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RAB40CQ96S21 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB40CQ96S21 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB40CQ96S21 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RAB40CQ96S21 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RAB40CQ96S21 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB40CQ96S21 FOXO1B-201ENST00000504678 1527 ntBASIC12.52□□□□□ -0.41
RAB40CQ96S21 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
RAB40CQ96S21 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB40CQ96S21 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.52□□□□□ -0.41
RAB40CQ96S21 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
RAB40CQ96S21 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB40CQ96S21 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB40CQ96S21 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB40CQ96S21 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB40CQ96S21 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB40CQ96S21 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB40CQ96S21 AC010327.5-201ENST00000586923 3061 ntBASIC12.51□□□□□ -0.41
RAB40CQ96S21 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.51□□□□□ -0.41
RAB40CQ96S21 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB40CQ96S21 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
RAB40CQ96S21 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
RAB40CQ96S21 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB40CQ96S21 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB40CQ96S21 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB40CQ96S21 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB40CQ96S21 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB40CQ96S21 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB40CQ96S21 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.51□□□□□ -0.41
RAB40CQ96S21 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB40CQ96S21 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
RAB40CQ96S21 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
RAB40CQ96S21 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB40CQ96S21 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
RAB40CQ96S21 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB40CQ96S21 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.51□□□□□ -0.41
RAB40CQ96S21 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.51□□□□□ -0.41
RAB40CQ96S21 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB40CQ96S21 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC12.51□□□□□ -0.41
RAB40CQ96S21 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB40CQ96S21 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB40CQ96S21 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.51□□□□□ -0.41
RAB40CQ96S21 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB40CQ96S21 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.51□□□□□ -0.41
RAB40CQ96S21 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB40CQ96S21 AC018529.2-202ENST00000611482 3087 ntBASIC12.51□□□□□ -0.41
RAB40CQ96S21 IL9RP2-201ENST00000423948 1312 ntBASIC12.51□□□□□ -0.41
RAB40CQ96S21 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB40CQ96S21 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB40CQ96S21 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB40CQ96S21 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RAB40CQ96S21 AC015802.1-201ENST00000588104 1449 ntBASIC12.51□□□□□ -0.41
RAB40CQ96S21 AC025580.3-201ENST00000617932 1424 ntBASIC12.51□□□□□ -0.41
RAB40CQ96S21 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB40CQ96S21 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB40CQ96S21 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB40CQ96S21 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB40CQ96S21 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.51□□□□□ -0.41
RAB40CQ96S21 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.51□□□□□ -0.41
RAB40CQ96S21 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB40CQ96S21 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB40CQ96S21 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.51□□□□□ -0.41
RAB40CQ96S21 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB40CQ96S21 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
RAB40CQ96S21 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB40CQ96S21 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB40CQ96S21 AC152010.1-201ENST00000415779 2006 ntBASIC12.5□□□□□ -0.41
RAB40CQ96S21 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
RAB40CQ96S21 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RAB40CQ96S21 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB40CQ96S21 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB40CQ96S21 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB40CQ96S21 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
RAB40CQ96S21 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB40CQ96S21 AC097359.2-201ENST00000604992 2389 ntBASIC12.5□□□□□ -0.41
RAB40CQ96S21 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB40CQ96S21 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB40CQ96S21 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RAB40CQ96S21 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB40CQ96S21 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
RAB40CQ96S21 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB40CQ96S21 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB40CQ96S21 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RAB40CQ96S21 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
RAB40CQ96S21 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB40CQ96S21 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB40CQ96S21 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.5□□□□□ -0.41
RAB40CQ96S21 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.5□□□□□ -0.41
RAB40CQ96S21 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms