Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.05■□□□□ -0
RAB3IPQ96QF0 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.05■□□□□ -0
RAB3IPQ96QF0 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
RAB3IPQ96QF0 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB3IPQ96QF0 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB3IPQ96QF0 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RAB3IPQ96QF0 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB3IPQ96QF0 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RAB3IPQ96QF0 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC15.04■□□□□ -0
RAB3IPQ96QF0 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
RAB3IPQ96QF0 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RAB3IPQ96QF0 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAB3IPQ96QF0 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.04■□□□□ -0
RAB3IPQ96QF0 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAB3IPQ96QF0 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB3IPQ96QF0 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
RAB3IPQ96QF0 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.04■□□□□ -0
RAB3IPQ96QF0 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.04■□□□□ -0
RAB3IPQ96QF0 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB3IPQ96QF0 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC15.04■□□□□ -0
RAB3IPQ96QF0 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB3IPQ96QF0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAB3IPQ96QF0 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.04■□□□□ -0
RAB3IPQ96QF0 AP005117.1-201ENST00000584346 1413 ntBASIC15.04■□□□□ -0
RAB3IPQ96QF0 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.04■□□□□ -0
RAB3IPQ96QF0 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.04■□□□□ -0
RAB3IPQ96QF0 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
RAB3IPQ96QF0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.04■□□□□ -0
RAB3IPQ96QF0 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.04■□□□□ -0
RAB3IPQ96QF0 KRT17P6-201ENST00000453795 1220 ntBASIC15.04■□□□□ -0
RAB3IPQ96QF0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.04■□□□□ -0
RAB3IPQ96QF0 TMEM198B-204ENST00000484016 896 ntBASIC15.04■□□□□ -0
RAB3IPQ96QF0 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.04■□□□□ -0
RAB3IPQ96QF0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.04■□□□□ -0
RAB3IPQ96QF0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.04■□□□□ -0
RAB3IPQ96QF0 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
RAB3IPQ96QF0 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.04■□□□□ -0
RAB3IPQ96QF0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.04■□□□□ -0
RAB3IPQ96QF0 AC002347.1-201ENST00000569543 541 ntBASIC15.04■□□□□ -0
RAB3IPQ96QF0 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RAB3IPQ96QF0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.04■□□□□ -0
RAB3IPQ96QF0 AL358472.4-201ENST00000633140 710 ntBASIC15.04■□□□□ -0
RAB3IPQ96QF0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.04■□□□□ -0
RAB3IPQ96QF0 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC15.04■□□□□ -0
RAB3IPQ96QF0 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RAB3IPQ96QF0 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAB3IPQ96QF0 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB3IPQ96QF0 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB3IPQ96QF0 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC15.04■□□□□ -0
RAB3IPQ96QF0 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB3IPQ96QF0 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.04■□□□□ -0
RAB3IPQ96QF0 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB3IPQ96QF0 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
RAB3IPQ96QF0 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.04■□□□□ -0
RAB3IPQ96QF0 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
RAB3IPQ96QF0 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB3IPQ96QF0 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RAB3IPQ96QF0 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAB3IPQ96QF0 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.03■□□□□ -0
RAB3IPQ96QF0 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAB3IPQ96QF0 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.03■□□□□ -0
RAB3IPQ96QF0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAB3IPQ96QF0 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.03■□□□□ -0
RAB3IPQ96QF0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
RAB3IPQ96QF0 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RAB3IPQ96QF0 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
RAB3IPQ96QF0 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB3IPQ96QF0 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
RAB3IPQ96QF0 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB3IPQ96QF0 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RAB3IPQ96QF0 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB3IPQ96QF0 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RAB3IPQ96QF0 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RAB3IPQ96QF0 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RAB3IPQ96QF0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RAB3IPQ96QF0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.03■□□□□ -0
RAB3IPQ96QF0 AL691432.1-201ENST00000596308 1422 ntBASIC15.03■□□□□ -0
RAB3IPQ96QF0 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB3IPQ96QF0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.03■□□□□ -0
RAB3IPQ96QF0 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC15.03■□□□□ -0
RAB3IPQ96QF0 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAB3IPQ96QF0 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB3IPQ96QF0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB3IPQ96QF0 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC15.03■□□□□ -0
RAB3IPQ96QF0 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RAB3IPQ96QF0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.03■□□□□ -0
RAB3IPQ96QF0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.03■□□□□ -0
RAB3IPQ96QF0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB3IPQ96QF0 AC004945.1-201ENST00000416738 983 ntBASIC15.03■□□□□ -0
RAB3IPQ96QF0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAB3IPQ96QF0 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.03■□□□□ -0
RAB3IPQ96QF0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
RAB3IPQ96QF0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
RAB3IPQ96QF0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.03■□□□□ -0
RAB3IPQ96QF0 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.03■□□□□ -0
RAB3IPQ96QF0 AP000845.1-201ENST00000581677 2131 ntBASIC15.03■□□□□ -0
RAB3IPQ96QF0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
RAB3IPQ96QF0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RAB3IPQ96QF0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
RAB3IPQ96QF0 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms