Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DDX11Q96FC9 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
DDX11Q96FC9 Z97205.2-201ENST00000564697 1639 ntBASIC18.28■□□□□ 0.52
DDX11Q96FC9 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DDX11Q96FC9 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
DDX11Q96FC9 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DDX11Q96FC9 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DDX11Q96FC9 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.28■□□□□ 0.52
DDX11Q96FC9 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DDX11Q96FC9 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
DDX11Q96FC9 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.28■□□□□ 0.52
DDX11Q96FC9 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DDX11Q96FC9 MIR658-201ENST00000385210 100 ntBASIC18.28■□□□□ 0.52
DDX11Q96FC9 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
DDX11Q96FC9 MIR1909-201ENST00000411312 80 ntBASIC18.28■□□□□ 0.52
DDX11Q96FC9 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
DDX11Q96FC9 HLA-V-201ENST00000429037 534 ntBASIC18.28■□□□□ 0.52
DDX11Q96FC9 AC007389.4-201ENST00000454674 793 ntBASIC18.28■□□□□ 0.52
DDX11Q96FC9 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.28■□□□□ 0.52
DDX11Q96FC9 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.28■□□□□ 0.52
DDX11Q96FC9 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.28■□□□□ 0.52
DDX11Q96FC9 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DDX11Q96FC9 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.28■□□□□ 0.52
DDX11Q96FC9 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.28■□□□□ 0.52
DDX11Q96FC9 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.28■□□□□ 0.52
DDX11Q96FC9 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
DDX11Q96FC9 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
DDX11Q96FC9 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DDX11Q96FC9 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DDX11Q96FC9 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
DDX11Q96FC9 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DDX11Q96FC9 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
DDX11Q96FC9 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
DDX11Q96FC9 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
DDX11Q96FC9 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.28■□□□□ 0.52
DDX11Q96FC9 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.28■□□□□ 0.52
DDX11Q96FC9 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DDX11Q96FC9 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.28■□□□□ 0.52
DDX11Q96FC9 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.28■□□□□ 0.52
DDX11Q96FC9 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.28■□□□□ 0.52
DDX11Q96FC9 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DDX11Q96FC9 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
DDX11Q96FC9 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
DDX11Q96FC9 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
DDX11Q96FC9 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
DDX11Q96FC9 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
DDX11Q96FC9 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DDX11Q96FC9 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DDX11Q96FC9 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DDX11Q96FC9 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DDX11Q96FC9 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.27■□□□□ 0.52
DDX11Q96FC9 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DDX11Q96FC9 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DDX11Q96FC9 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.27■□□□□ 0.52
DDX11Q96FC9 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DDX11Q96FC9 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.27■□□□□ 0.52
DDX11Q96FC9 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DDX11Q96FC9 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DDX11Q96FC9 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DDX11Q96FC9 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
DDX11Q96FC9 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DDX11Q96FC9 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DDX11Q96FC9 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.27■□□□□ 0.52
DDX11Q96FC9 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
DDX11Q96FC9 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.27■□□□□ 0.52
DDX11Q96FC9 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DDX11Q96FC9 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.27■□□□□ 0.52
DDX11Q96FC9 CICP11-201ENST00000434745 2827 ntBASIC18.27■□□□□ 0.52
DDX11Q96FC9 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DDX11Q96FC9 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DDX11Q96FC9 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
DDX11Q96FC9 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
DDX11Q96FC9 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
DDX11Q96FC9 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.27■□□□□ 0.51
DDX11Q96FC9 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
DDX11Q96FC9 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
DDX11Q96FC9 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX11Q96FC9 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
DDX11Q96FC9 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX11Q96FC9 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.26■□□□□ 0.51
DDX11Q96FC9 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
DDX11Q96FC9 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
DDX11Q96FC9 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
DDX11Q96FC9 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX11Q96FC9 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DDX11Q96FC9 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.26■□□□□ 0.51
DDX11Q96FC9 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX11Q96FC9 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX11Q96FC9 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.26■□□□□ 0.51
DDX11Q96FC9 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.26■□□□□ 0.51
DDX11Q96FC9 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.26■□□□□ 0.51
DDX11Q96FC9 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX11Q96FC9 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
DDX11Q96FC9 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.26■□□□□ 0.51
DDX11Q96FC9 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
DDX11Q96FC9 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX11Q96FC9 LINC01115-203ENST00000606068 577 ntBASIC18.26■□□□□ 0.51
DDX11Q96FC9 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.26■□□□□ 0.51
DDX11Q96FC9 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX11Q96FC9 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms