Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 CU634019.7-201ENST00000624153 1185 ntBASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 FP236241.2-201ENST00000624906 1185 ntBASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CLDND2Q8NHS1 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 AL607033.1-201ENST00000623900 1599 ntBASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 TMBIM7P-203ENST00000641617 1718 ntBASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 AC022210.1-201ENST00000449856 793 ntBASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 AL359711.2-201ENST00000563105 872 ntBASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 AC097359.3-201ENST00000603982 1210 ntBASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CLDND2Q8NHS1 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 AC069224.1-201ENST00000566372 1715 ntBASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDND2Q8NHS1 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms