Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.64□□□□□ -0.23
RTTNQ86VV8 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.64□□□□□ -0.23
RTTNQ86VV8 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTTNQ86VV8 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RTTNQ86VV8 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTTNQ86VV8 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTTNQ86VV8 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTTNQ86VV8 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RTTNQ86VV8 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RTTNQ86VV8 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTTNQ86VV8 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTTNQ86VV8 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTTNQ86VV8 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTTNQ86VV8 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTTNQ86VV8 SPDYE19P-201ENST00000338590 713 ntBASIC13.64□□□□□ -0.23
RTTNQ86VV8 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.64□□□□□ -0.23
RTTNQ86VV8 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RTTNQ86VV8 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTTNQ86VV8 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RTTNQ86VV8 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.64□□□□□ -0.23
RTTNQ86VV8 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RTTNQ86VV8 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.64□□□□□ -0.23
RTTNQ86VV8 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RTTNQ86VV8 INE1-201ENST00000456273 945 ntBASIC13.64□□□□□ -0.23
RTTNQ86VV8 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTTNQ86VV8 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.64□□□□□ -0.23
RTTNQ86VV8 AC004461.2-201ENST00000629517 803 ntBASIC13.64□□□□□ -0.23
RTTNQ86VV8 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTTNQ86VV8 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RTTNQ86VV8 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RTTNQ86VV8 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTTNQ86VV8 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RTTNQ86VV8 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
RTTNQ86VV8 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.64□□□□□ -0.23
RTTNQ86VV8 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RTTNQ86VV8 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTTNQ86VV8 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RTTNQ86VV8 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
RTTNQ86VV8 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
RTTNQ86VV8 AC087481.3-201ENST00000602886 1894 ntBASIC13.63□□□□□ -0.23
RTTNQ86VV8 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTTNQ86VV8 AC067930.6-201ENST00000623257 4947 ntBASIC13.63□□□□□ -0.23
RTTNQ86VV8 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTTNQ86VV8 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTTNQ86VV8 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RTTNQ86VV8 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.63□□□□□ -0.23
RTTNQ86VV8 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RTTNQ86VV8 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RTTNQ86VV8 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.63□□□□□ -0.23
RTTNQ86VV8 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RTTNQ86VV8 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.63□□□□□ -0.23
RTTNQ86VV8 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RTTNQ86VV8 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.63□□□□□ -0.23
RTTNQ86VV8 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.63□□□□□ -0.23
RTTNQ86VV8 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RTTNQ86VV8 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.63□□□□□ -0.23
RTTNQ86VV8 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.63□□□□□ -0.23
RTTNQ86VV8 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.63□□□□□ -0.23
RTTNQ86VV8 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RTTNQ86VV8 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
RTTNQ86VV8 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTTNQ86VV8 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTTNQ86VV8 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTTNQ86VV8 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
RTTNQ86VV8 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.63□□□□□ -0.23
RTTNQ86VV8 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTTNQ86VV8 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.63□□□□□ -0.23
RTTNQ86VV8 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RTTNQ86VV8 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTTNQ86VV8 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.63□□□□□ -0.23
RTTNQ86VV8 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTTNQ86VV8 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.63□□□□□ -0.23
RTTNQ86VV8 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RTTNQ86VV8 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTTNQ86VV8 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.63□□□□□ -0.23
RTTNQ86VV8 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.63□□□□□ -0.23
RTTNQ86VV8 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.63□□□□□ -0.23
RTTNQ86VV8 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RTTNQ86VV8 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTTNQ86VV8 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTTNQ86VV8 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.63□□□□□ -0.23
RTTNQ86VV8 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
RTTNQ86VV8 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RTTNQ86VV8 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTTNQ86VV8 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC13.63□□□□□ -0.23
RTTNQ86VV8 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.63□□□□□ -0.23
RTTNQ86VV8 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.63□□□□□ -0.23
RTTNQ86VV8 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.63□□□□□ -0.23
RTTNQ86VV8 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.63□□□□□ -0.23
RTTNQ86VV8 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.63□□□□□ -0.23
RTTNQ86VV8 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.63□□□□□ -0.23
RTTNQ86VV8 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.63□□□□□ -0.23
RTTNQ86VV8 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTTNQ86VV8 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.63□□□□□ -0.23
RTTNQ86VV8 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTTNQ86VV8 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RTTNQ86VV8 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTTNQ86VV8 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
RTTNQ86VV8 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RTTNQ86VV8 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 200.5 ms