Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 RPS8P6-201ENST00000426177 609 ntBASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 AC245100.5-201ENST00000452108 331 ntBASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 SLC25A39P2-201ENST00000537614 270 ntBASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 MIR4321-201ENST00000592276 80 ntBASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 AL596442.2-201ENST00000610240 980 ntBASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 NUTM2HP-201ENST00000442076 2498 ntBASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM53Q6P2H8 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 FAM220BP-201ENST00000377689 816 ntBASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 AC023141.5-201ENST00000458585 616 ntBASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 AC084121.4-201ENST00000641598 221 ntBASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 AF228730.8-201ENST00000642140 221 ntBASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 AC136759.1-202ENST00000530858 2194 ntBASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TMEM53Q6P2H8 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TMEM53Q6P2H8 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
TMEM53Q6P2H8 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TMEM53Q6P2H8 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
TMEM53Q6P2H8 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.21□□□□□ -0.14
TMEM53Q6P2H8 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.21□□□□□ -0.14
TMEM53Q6P2H8 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TMEM53Q6P2H8 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
TMEM53Q6P2H8 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.21□□□□□ -0.14
TMEM53Q6P2H8 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.21□□□□□ -0.14
TMEM53Q6P2H8 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM53Q6P2H8 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms