Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
EFNB1P98172 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
EFNB1P98172 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNB1P98172 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
EFNB1P98172 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNB1P98172 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
EFNB1P98172 RPL37AP1-201ENST00000412502 279 ntBASIC13.7□□□□□ -0.22
EFNB1P98172 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.7□□□□□ -0.22
EFNB1P98172 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
EFNB1P98172 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.7□□□□□ -0.22
EFNB1P98172 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
EFNB1P98172 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.7□□□□□ -0.22
EFNB1P98172 GAPDHP40-201ENST00000505218 1006 ntBASIC13.7□□□□□ -0.22
EFNB1P98172 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.7□□□□□ -0.22
EFNB1P98172 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.7□□□□□ -0.22
EFNB1P98172 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.7□□□□□ -0.22
EFNB1P98172 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
EFNB1P98172 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.7□□□□□ -0.22
EFNB1P98172 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.7□□□□□ -0.22
EFNB1P98172 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
EFNB1P98172 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
EFNB1P98172 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNB1P98172 AL157414.3-201ENST00000624276 1954 ntBASIC13.7□□□□□ -0.22
EFNB1P98172 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
EFNB1P98172 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNB1P98172 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.7□□□□□ -0.22
EFNB1P98172 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNB1P98172 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
EFNB1P98172 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
EFNB1P98172 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
EFNB1P98172 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNB1P98172 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNB1P98172 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNB1P98172 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.7□□□□□ -0.22
EFNB1P98172 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNB1P98172 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
EFNB1P98172 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
EFNB1P98172 PKD1P5-201ENST00000532415 10291 ntBASIC13.7□□□□□ -0.22
EFNB1P98172 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
EFNB1P98172 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.69□□□□□ -0.22
EFNB1P98172 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
EFNB1P98172 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
EFNB1P98172 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.69□□□□□ -0.22
EFNB1P98172 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.69□□□□□ -0.22
EFNB1P98172 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
EFNB1P98172 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
EFNB1P98172 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
EFNB1P98172 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
EFNB1P98172 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
EFNB1P98172 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
EFNB1P98172 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
EFNB1P98172 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.69□□□□□ -0.22
EFNB1P98172 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.69□□□□□ -0.22
EFNB1P98172 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
EFNB1P98172 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
EFNB1P98172 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
EFNB1P98172 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
EFNB1P98172 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
EFNB1P98172 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
EFNB1P98172 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.69□□□□□ -0.22
EFNB1P98172 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.69□□□□□ -0.22
EFNB1P98172 CEND1P1-201ENST00000451006 455 ntBASIC13.69□□□□□ -0.22
EFNB1P98172 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.69□□□□□ -0.22
EFNB1P98172 YBX1P5-201ENST00000509441 847 ntBASIC13.69□□□□□ -0.22
EFNB1P98172 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.69□□□□□ -0.22
EFNB1P98172 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.69□□□□□ -0.22
EFNB1P98172 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
EFNB1P98172 AL589739.1-201ENST00000607720 493 ntBASIC13.69□□□□□ -0.22
EFNB1P98172 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.69□□□□□ -0.22
EFNB1P98172 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.69□□□□□ -0.22
EFNB1P98172 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.69□□□□□ -0.22
EFNB1P98172 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.69□□□□□ -0.22
EFNB1P98172 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
EFNB1P98172 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
EFNB1P98172 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
EFNB1P98172 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
EFNB1P98172 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
EFNB1P98172 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
EFNB1P98172 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
EFNB1P98172 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.69□□□□□ -0.22
EFNB1P98172 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
EFNB1P98172 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.69□□□□□ -0.22
EFNB1P98172 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
EFNB1P98172 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
EFNB1P98172 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.69□□□□□ -0.22
EFNB1P98172 AC016397.2-201ENST00000624848 1985 ntBASIC13.69□□□□□ -0.22
EFNB1P98172 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
EFNB1P98172 AL137784.3-201ENST00000623858 2288 ntBASIC13.69□□□□□ -0.22
EFNB1P98172 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
EFNB1P98172 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
EFNB1P98172 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
EFNB1P98172 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.68□□□□□ -0.22
EFNB1P98172 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms