Protein–RNA interactions for Protein: P52951

GBX2, Homeobox protein GBX-2, humanhuman

Predicted RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBX2P52951 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GBX2P52951 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
GBX2P52951 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
GBX2P52951 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.76□□□□□ -0.21
GBX2P52951 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.76□□□□□ -0.21
GBX2P52951 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
GBX2P52951 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.76□□□□□ -0.21
GBX2P52951 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GBX2P52951 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GBX2P52951 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.76□□□□□ -0.21
GBX2P52951 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.76□□□□□ -0.21
GBX2P52951 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GBX2P52951 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GBX2P52951 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
GBX2P52951 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GBX2P52951 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GBX2P52951 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GBX2P52951 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GBX2P52951 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.75□□□□□ -0.21
GBX2P52951 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
GBX2P52951 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GBX2P52951 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.75□□□□□ -0.21
GBX2P52951 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.75□□□□□ -0.21
GBX2P52951 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GBX2P52951 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GBX2P52951 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GBX2P52951 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GBX2P52951 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GBX2P52951 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GBX2P52951 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
GBX2P52951 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GBX2P52951 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.75□□□□□ -0.21
GBX2P52951 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GBX2P52951 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
GBX2P52951 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GBX2P52951 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
GBX2P52951 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.75□□□□□ -0.21
GBX2P52951 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.75□□□□□ -0.21
GBX2P52951 GHSR-202ENST00000427970 912 ntBASIC13.75□□□□□ -0.21
GBX2P52951 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.75□□□□□ -0.21
GBX2P52951 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.75□□□□□ -0.21
GBX2P52951 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.75□□□□□ -0.21
GBX2P52951 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GBX2P52951 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.75□□□□□ -0.21
GBX2P52951 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.75□□□□□ -0.21
GBX2P52951 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.75□□□□□ -0.21
GBX2P52951 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GBX2P52951 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
GBX2P52951 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GBX2P52951 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GBX2P52951 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
GBX2P52951 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.75□□□□□ -0.21
GBX2P52951 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.75□□□□□ -0.21
GBX2P52951 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
GBX2P52951 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
GBX2P52951 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
GBX2P52951 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.75□□□□□ -0.21
GBX2P52951 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GBX2P52951 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.75□□□□□ -0.21
GBX2P52951 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
GBX2P52951 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
GBX2P52951 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
GBX2P52951 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GBX2P52951 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
GBX2P52951 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
GBX2P52951 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
GBX2P52951 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
GBX2P52951 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GBX2P52951 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GBX2P52951 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GBX2P52951 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GBX2P52951 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.75□□□□□ -0.21
GBX2P52951 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.74□□□□□ -0.21
GBX2P52951 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
GBX2P52951 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GBX2P52951 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GBX2P52951 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.74□□□□□ -0.21
GBX2P52951 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GBX2P52951 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.74□□□□□ -0.21
GBX2P52951 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GBX2P52951 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GBX2P52951 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
GBX2P52951 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.74□□□□□ -0.21
GBX2P52951 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
GBX2P52951 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
GBX2P52951 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GBX2P52951 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GBX2P52951 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GBX2P52951 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.74□□□□□ -0.21
GBX2P52951 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
GBX2P52951 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.74□□□□□ -0.21
GBX2P52951 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GBX2P52951 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
GBX2P52951 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
GBX2P52951 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.74□□□□□ -0.21
GBX2P52951 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.74□□□□□ -0.21
GBX2P52951 SPDYE11-202ENST00000450699 704 ntBASIC13.74□□□□□ -0.21
GBX2P52951 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.74□□□□□ -0.21
GBX2P52951 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.74□□□□□ -0.21
GBX2P52951 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms