Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KRT6CP48668 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
KRT6CP48668 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT6CP48668 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KRT6CP48668 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT6CP48668 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.97□□□□□ -0.01
KRT6CP48668 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT6CP48668 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
KRT6CP48668 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.97□□□□□ -0.01
KRT6CP48668 FGD5P1-202ENST00000614866 2498 ntBASIC14.97□□□□□ -0.01
KRT6CP48668 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
KRT6CP48668 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KRT6CP48668 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT6CP48668 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT6CP48668 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
KRT6CP48668 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
KRT6CP48668 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.96□□□□□ -0.01
KRT6CP48668 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.96□□□□□ -0.01
KRT6CP48668 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT6CP48668 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.96□□□□□ -0.01
KRT6CP48668 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.96□□□□□ -0.01
KRT6CP48668 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT6CP48668 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT6CP48668 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT6CP48668 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
KRT6CP48668 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT6CP48668 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT6CP48668 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
KRT6CP48668 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
KRT6CP48668 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.96□□□□□ -0.01
KRT6CP48668 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
KRT6CP48668 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT6CP48668 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.96□□□□□ -0.01
KRT6CP48668 KLF2P3-201ENST00000451977 1087 ntBASIC14.96□□□□□ -0.01
KRT6CP48668 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.96□□□□□ -0.01
KRT6CP48668 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.96□□□□□ -0.01
KRT6CP48668 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.96□□□□□ -0.01
KRT6CP48668 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.96□□□□□ -0.01
KRT6CP48668 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.96□□□□□ -0.01
KRT6CP48668 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT6CP48668 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
KRT6CP48668 AC010336.2-201ENST00000564226 506 ntBASIC14.96□□□□□ -0.01
KRT6CP48668 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.96□□□□□ -0.01
KRT6CP48668 LINC01115-203ENST00000606068 577 ntBASIC14.96□□□□□ -0.01
KRT6CP48668 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
KRT6CP48668 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.96□□□□□ -0.01
KRT6CP48668 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT6CP48668 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT6CP48668 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT6CP48668 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
KRT6CP48668 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT6CP48668 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT6CP48668 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
KRT6CP48668 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.96□□□□□ -0.02
KRT6CP48668 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
KRT6CP48668 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
KRT6CP48668 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.02
KRT6CP48668 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
KRT6CP48668 AC138969.3-201ENST00000546612 1459 ntBASIC14.95□□□□□ -0.02
KRT6CP48668 AC138932.2-201ENST00000548268 1459 ntBASIC14.95□□□□□ -0.02
KRT6CP48668 AC126755.4-201ENST00000549796 1459 ntBASIC14.95□□□□□ -0.02
KRT6CP48668 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
KRT6CP48668 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.95□□□□□ -0.02
KRT6CP48668 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
KRT6CP48668 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
KRT6CP48668 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
KRT6CP48668 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
KRT6CP48668 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
KRT6CP48668 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
KRT6CP48668 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
KRT6CP48668 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
KRT6CP48668 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
KRT6CP48668 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
KRT6CP48668 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
KRT6CP48668 MIR1233-2-201ENST00000408138 82 ntBASIC14.95□□□□□ -0.02
KRT6CP48668 MIR1233-1-201ENST00000408722 82 ntBASIC14.95□□□□□ -0.02
KRT6CP48668 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.95□□□□□ -0.02
KRT6CP48668 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
KRT6CP48668 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.95□□□□□ -0.02
KRT6CP48668 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.95□□□□□ -0.02
KRT6CP48668 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.95□□□□□ -0.02
KRT6CP48668 AC067863.1-201ENST00000494933 530 ntBASIC14.95□□□□□ -0.02
KRT6CP48668 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.95□□□□□ -0.02
KRT6CP48668 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.95□□□□□ -0.02
KRT6CP48668 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.95□□□□□ -0.02
KRT6CP48668 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
KRT6CP48668 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
KRT6CP48668 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
KRT6CP48668 AC140878.1-201ENST00000565277 250 ntBASIC14.95□□□□□ -0.02
KRT6CP48668 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.95□□□□□ -0.02
KRT6CP48668 AC025181.2-201ENST00000606994 802 ntBASIC14.95□□□□□ -0.02
KRT6CP48668 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.95□□□□□ -0.02
KRT6CP48668 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
KRT6CP48668 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
KRT6CP48668 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
KRT6CP48668 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
KRT6CP48668 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
KRT6CP48668 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
KRT6CP48668 AL121723.1-201ENST00000445194 1519 ntBASIC14.95□□□□□ -0.02
KRT6CP48668 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms