Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
PCP4P48539 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PCP4P48539 CAMK1G-202ENST00000361322 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PCP4P48539 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
PCP4P48539 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
PCP4P48539 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC10.13□□□□□ -0.79
PCP4P48539 AJ239328.1-201ENST00000626237 4807 ntTSL 5 BASIC10.13□□□□□ -0.79
PCP4P48539 C22orf46-201ENST00000402966 4975 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PCP4P48539 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PCP4P48539 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC10.13□□□□□ -0.79
PCP4P48539 LBH-205ENST00000407930 756 ntTSL 2 BASIC10.13□□□□□ -0.79
PCP4P48539 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
PCP4P48539 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC10.13□□□□□ -0.79
PCP4P48539 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC10.13□□□□□ -0.79
PCP4P48539 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC10.13□□□□□ -0.79
PCP4P48539 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC10.13□□□□□ -0.79
PCP4P48539 GCN1-201ENST00000300648 8675 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PCP4P48539 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PCP4P48539 C1S-203ENST00000402681 2522 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
PCP4P48539 PCAT1-202ENST00000561978 1992 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
PCP4P48539 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PCP4P48539 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC10.13□□□□□ -0.79
PCP4P48539 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC10.13□□□□□ -0.79
PCP4P48539 NFXL1-201ENST00000329043 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PCP4P48539 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PCP4P48539 C14orf159-234ENST00000525393 2471 ntTSL 5 BASIC10.13□□□□□ -0.79
PCP4P48539 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
PCP4P48539 DCLK2-202ENST00000302176 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
PCP4P48539 SCN8A-208ENST00000599343 5976 ntAPPRIS ALT1 TSL 5 BASIC10.13□□□□□ -0.79
PCP4P48539 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PCP4P48539 ATF3-206ENST00000366987 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PCP4P48539 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
PCP4P48539 CPNE4-209ENST00000512055 5431 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
PCP4P48539 ALOX5-208ENST00000612635 1945 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
PCP4P48539 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC10.13□□□□□ -0.79
PCP4P48539 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC10.13□□□□□ -0.79
PCP4P48539 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PCP4P48539 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
PCP4P48539 GGA2-201ENST00000309859 5973 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
PCP4P48539 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC10.13□□□□□ -0.79
PCP4P48539 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
PCP4P48539 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
PCP4P48539 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PCP4P48539 PRDM2-204ENST00000376048 2688 ntTSL 2 BASIC10.12□□□□□ -0.79
PCP4P48539 GPR132-201ENST00000329797 3660 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
PCP4P48539 ZNF766-202ENST00000593612 2331 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
PCP4P48539 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PCP4P48539 TSPAN9-206ENST00000537971 4284 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
PCP4P48539 GLYR1-201ENST00000321919 3772 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
PCP4P48539 NOP2-207ENST00000537442 2613 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
PCP4P48539 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PCP4P48539 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC10.12□□□□□ -0.79
PCP4P48539 MED29-202ENST00000594368 1471 ntTSL 2 BASIC10.12□□□□□ -0.79
PCP4P48539 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PCP4P48539 SPDYE8P-201ENST00000333385 2281 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
PCP4P48539 SPDYE11-201ENST00000340073 2281 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
PCP4P48539 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
PCP4P48539 SPDYE9P-203ENST00000575125 2281 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
PCP4P48539 EMG1-202ENST00000599672 4898 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PCP4P48539 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
PCP4P48539 AP003969.2-201ENST00000623739 2275 ntBASIC10.12□□□□□ -0.79
PCP4P48539 KCNH6-201ENST00000314672 3062 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
PCP4P48539 TSNAXIP1-201ENST00000388833 2429 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
PCP4P48539 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PCP4P48539 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC10.12□□□□□ -0.79
PCP4P48539 ZC3H18-202ENST00000452588 3211 ntTSL 2 BASIC10.12□□□□□ -0.79
PCP4P48539 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PCP4P48539 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PCP4P48539 LINC00452-202ENST00000609661 2896 ntTSL 5 BASIC10.12□□□□□ -0.79
PCP4P48539 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
PCP4P48539 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
PCP4P48539 YBX1P1-201ENST00000445822 960 ntBASIC10.12□□□□□ -0.79
PCP4P48539 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC10.12□□□□□ -0.79
PCP4P48539 METRNL-202ENST00000570778 967 ntTSL 5 BASIC10.12□□□□□ -0.79
PCP4P48539 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
PCP4P48539 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
PCP4P48539 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
PCP4P48539 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
PCP4P48539 FCGR3A-202ENST00000367969 2385 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
PCP4P48539 DLG5-201ENST00000372391 7415 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PCP4P48539 TAS1R2-201ENST00000375371 2542 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
PCP4P48539 CHMP2B-203ENST00000471660 2528 ntTSL 2 BASIC10.12□□□□□ -0.79
PCP4P48539 AC006504.4-201ENST00000592118 1568 ntBASIC10.12□□□□□ -0.79
PCP4P48539 ATP2B2-202ENST00000360273 8962 ntTSL 5 BASIC10.12□□□□□ -0.79
PCP4P48539 APOL1-206ENST00000426053 2808 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
PCP4P48539 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PCP4P48539 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC10.12□□□□□ -0.79
PCP4P48539 SEC23B-202ENST00000336714 3411 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PCP4P48539 ADAMTS4-202ENST00000367996 9773 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PCP4P48539 MAP2K4-202ENST00000415385 3856 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
PCP4P48539 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PCP4P48539 KIF22-202ENST00000400751 2493 ntTSL 2 BASIC10.12□□□□□ -0.79
PCP4P48539 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PCP4P48539 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
PCP4P48539 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC10.12□□□□□ -0.79
PCP4P48539 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
PCP4P48539 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
PCP4P48539 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC10.12□□□□□ -0.79
PCP4P48539 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
PCP4P48539 ZFP64-202ENST00000346617 2876 ntTSL 2 BASIC10.12□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms