Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHC1P29353 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.15□□□□□ -0.14
SHC1P29353 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHC1P29353 AGAP7P-201ENST00000582299 2062 ntBASIC14.14□□□□□ -0.15
SHC1P29353 AGAP14-201ENST00000624701 2060 ntBASIC14.14□□□□□ -0.15
SHC1P29353 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHC1P29353 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHC1P29353 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SHC1P29353 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.14□□□□□ -0.15
SHC1P29353 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SHC1P29353 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.14□□□□□ -0.15
SHC1P29353 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHC1P29353 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.14□□□□□ -0.15
SHC1P29353 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHC1P29353 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SHC1P29353 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHC1P29353 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SHC1P29353 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.14□□□□□ -0.15
SHC1P29353 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SHC1P29353 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
SHC1P29353 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHC1P29353 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHC1P29353 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHC1P29353 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
SHC1P29353 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SHC1P29353 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SHC1P29353 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.14□□□□□ -0.15
SHC1P29353 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.14□□□□□ -0.15
SHC1P29353 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
SHC1P29353 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.14□□□□□ -0.15
SHC1P29353 AL158212.4-201ENST00000624062 1286 ntBASIC14.14□□□□□ -0.15
SHC1P29353 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
SHC1P29353 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SHC1P29353 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SHC1P29353 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.14□□□□□ -0.15
SHC1P29353 LINC00528-201ENST00000600723 2160 ntBASIC14.14□□□□□ -0.15
SHC1P29353 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SHC1P29353 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHC1P29353 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SHC1P29353 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
SHC1P29353 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHC1P29353 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHC1P29353 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.14□□□□□ -0.15
SHC1P29353 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
SHC1P29353 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SHC1P29353 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHC1P29353 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHC1P29353 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SHC1P29353 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.14□□□□□ -0.15
SHC1P29353 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.13□□□□□ -0.15
SHC1P29353 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHC1P29353 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHC1P29353 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHC1P29353 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.13□□□□□ -0.15
SHC1P29353 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.13□□□□□ -0.15
SHC1P29353 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.13□□□□□ -0.15
SHC1P29353 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.13□□□□□ -0.15
SHC1P29353 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SHC1P29353 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHC1P29353 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHC1P29353 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SHC1P29353 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHC1P29353 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.13□□□□□ -0.15
SHC1P29353 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SHC1P29353 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SHC1P29353 MEIS3P1-201ENST00000495167 958 ntBASIC14.13□□□□□ -0.15
SHC1P29353 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.13□□□□□ -0.15
SHC1P29353 TPRX2P-201ENST00000535362 881 ntBASIC14.13□□□□□ -0.15
SHC1P29353 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
SHC1P29353 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.13□□□□□ -0.15
SHC1P29353 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.13□□□□□ -0.15
SHC1P29353 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.13□□□□□ -0.15
SHC1P29353 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SHC1P29353 AL132655.2-201ENST00000596276 594 ntBASIC14.13□□□□□ -0.15
SHC1P29353 AC004233.3-201ENST00000607794 1269 ntBASIC14.13□□□□□ -0.15
SHC1P29353 AL391069.4-201ENST00000609583 481 ntBASIC14.13□□□□□ -0.15
SHC1P29353 AC007191.1-201ENST00000623179 2995 ntBASIC14.13□□□□□ -0.15
SHC1P29353 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SHC1P29353 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SHC1P29353 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHC1P29353 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.13□□□□□ -0.15
SHC1P29353 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.13□□□□□ -0.15
SHC1P29353 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHC1P29353 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SHC1P29353 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHC1P29353 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SHC1P29353 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHC1P29353 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SHC1P29353 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.12□□□□□ -0.15
SHC1P29353 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHC1P29353 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHC1P29353 AC013726.1-201ENST00000563747 2285 ntBASIC14.12□□□□□ -0.15
SHC1P29353 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SHC1P29353 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHC1P29353 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHC1P29353 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHC1P29353 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.12□□□□□ -0.15
SHC1P29353 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHC1P29353 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHC1P29353 TOMM22P5-201ENST00000416399 439 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms