Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 DRD5P1-201ENST00000456605 1438 ntBASIC13.2□□□□□ -0.3
CCL1P22362 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL1P22362 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL1P22362 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.2□□□□□ -0.3
CCL1P22362 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.2□□□□□ -0.3
CCL1P22362 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.2□□□□□ -0.3
CCL1P22362 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 AC007686.3-201ENST00000619017 3487 ntBASIC13.19□□□□□ -0.3
CCL1P22362 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.19□□□□□ -0.3
CCL1P22362 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
CCL1P22362 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.19□□□□□ -0.3
CCL1P22362 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CCL1P22362 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 CLK3P2-201ENST00000427566 1453 ntBASIC13.19□□□□□ -0.3
CCL1P22362 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CCL1P22362 SNX18-202ENST00000343017 3140 ntBASIC13.19□□□□□ -0.3
CCL1P22362 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CCL1P22362 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CCL1P22362 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.19□□□□□ -0.3
CCL1P22362 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.19□□□□□ -0.3
CCL1P22362 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CCL1P22362 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 HLA-K-203ENST00000430151 1046 ntBASIC13.19□□□□□ -0.3
CCL1P22362 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.19□□□□□ -0.3
CCL1P22362 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL1P22362 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 AC026410.3-201ENST00000514280 936 ntBASIC13.19□□□□□ -0.3
CCL1P22362 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CCL1P22362 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL1P22362 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.19□□□□□ -0.3
CCL1P22362 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.19□□□□□ -0.3
CCL1P22362 AP001160.2-201ENST00000596071 487 ntBASIC13.19□□□□□ -0.3
CCL1P22362 SRD5A3P1-201ENST00000603021 949 ntBASIC13.19□□□□□ -0.3
CCL1P22362 AL691403.2-201ENST00000618460 490 ntBASIC13.19□□□□□ -0.3
CCL1P22362 AC093028.1-201ENST00000622998 982 ntBASIC13.19□□□□□ -0.3
CCL1P22362 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
CCL1P22362 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CCL1P22362 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CCL1P22362 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL1P22362 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL1P22362 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.19□□□□□ -0.3
CCL1P22362 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL1P22362 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.19□□□□□ -0.3
CCL1P22362 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
CCL1P22362 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL1P22362 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CCL1P22362 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CCL1P22362 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL1P22362 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL1P22362 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL1P22362 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL1P22362 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL1P22362 AL157414.3-201ENST00000624276 1954 ntBASIC13.18□□□□□ -0.3
CCL1P22362 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL1P22362 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.18□□□□□ -0.3
CCL1P22362 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.18□□□□□ -0.3
CCL1P22362 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL1P22362 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL1P22362 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL1P22362 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.18□□□□□ -0.3
CCL1P22362 MIR943-201ENST00000401286 94 ntBASIC13.18□□□□□ -0.3
CCL1P22362 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.18□□□□□ -0.3
CCL1P22362 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.18□□□□□ -0.3
CCL1P22362 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.18□□□□□ -0.3
CCL1P22362 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
CCL1P22362 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL1P22362 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CCL1P22362 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL1P22362 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CCL1P22362 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.18□□□□□ -0.3
CCL1P22362 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms