Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
PDE6GP18545 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
PDE6GP18545 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
PDE6GP18545 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
PDE6GP18545 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
PDE6GP18545 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
PDE6GP18545 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC9.52□□□□□ -0.88
PDE6GP18545 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC9.52□□□□□ -0.89
PDE6GP18545 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC9.52□□□□□ -0.89
PDE6GP18545 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
PDE6GP18545 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
PDE6GP18545 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC9.52□□□□□ -0.89
PDE6GP18545 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
PDE6GP18545 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PDE6GP18545 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PDE6GP18545 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
PDE6GP18545 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC9.52□□□□□ -0.89
PDE6GP18545 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
PDE6GP18545 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PDE6GP18545 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PDE6GP18545 MAP1A-201ENST00000300231 10258 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
PDE6GP18545 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
PDE6GP18545 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
PDE6GP18545 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PDE6GP18545 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC9.52□□□□□ -0.89
PDE6GP18545 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
PDE6GP18545 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PDE6GP18545 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PDE6GP18545 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC9.52□□□□□ -0.89
PDE6GP18545 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
PDE6GP18545 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC9.52□□□□□ -0.89
PDE6GP18545 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC9.52□□□□□ -0.89
PDE6GP18545 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
PDE6GP18545 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PDE6GP18545 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC9.52□□□□□ -0.89
PDE6GP18545 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC9.52□□□□□ -0.89
PDE6GP18545 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC9.52□□□□□ -0.89
PDE6GP18545 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC9.52□□□□□ -0.89
PDE6GP18545 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.89
PDE6GP18545 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC9.52□□□□□ -0.89
PDE6GP18545 RNF126P1-202ENST00000569893 925 ntBASIC9.52□□□□□ -0.89
PDE6GP18545 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC9.52□□□□□ -0.89
PDE6GP18545 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.89
PDE6GP18545 AL139424.1-201ENST00000607572 797 ntBASIC9.52□□□□□ -0.89
PDE6GP18545 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
PDE6GP18545 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PDE6GP18545 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
PDE6GP18545 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
PDE6GP18545 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
PDE6GP18545 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PDE6GP18545 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC9.52□□□□□ -0.89
PDE6GP18545 AP001267.2-201ENST00000532619 2086 ntBASIC9.52□□□□□ -0.89
PDE6GP18545 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC9.52□□□□□ -0.89
PDE6GP18545 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC9.52□□□□□ -0.89
PDE6GP18545 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PDE6GP18545 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
PDE6GP18545 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PDE6GP18545 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
PDE6GP18545 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PDE6GP18545 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC9.52□□□□□ -0.89
PDE6GP18545 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
PDE6GP18545 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC9.52□□□□□ -0.89
PDE6GP18545 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
PDE6GP18545 PLEKHG3-201ENST00000247226 10351 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PDE6GP18545 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
PDE6GP18545 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC9.52□□□□□ -0.89
PDE6GP18545 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC9.52□□□□□ -0.89
PDE6GP18545 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC9.52□□□□□ -0.89
PDE6GP18545 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC9.52□□□□□ -0.89
PDE6GP18545 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PDE6GP18545 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
PDE6GP18545 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
PDE6GP18545 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
PDE6GP18545 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
PDE6GP18545 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PDE6GP18545 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC9.51□□□□□ -0.89
PDE6GP18545 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PDE6GP18545 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
PDE6GP18545 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
PDE6GP18545 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
PDE6GP18545 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
PDE6GP18545 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
PDE6GP18545 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
PDE6GP18545 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC9.51□□□□□ -0.89
PDE6GP18545 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PDE6GP18545 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PDE6GP18545 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
PDE6GP18545 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PDE6GP18545 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PDE6GP18545 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PDE6GP18545 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PDE6GP18545 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
PDE6GP18545 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PDE6GP18545 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PDE6GP18545 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC9.51□□□□□ -0.89
PDE6GP18545 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PDE6GP18545 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PDE6GP18545 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
PDE6GP18545 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC9.51□□□□□ -0.89
PDE6GP18545 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC9.51□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms