Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PRKCAP17252 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PRKCAP17252 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
PRKCAP17252 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
PRKCAP17252 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PRKCAP17252 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCAP17252 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCAP17252 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.32□□□□□ -0.12
PRKCAP17252 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.32□□□□□ -0.12
PRKCAP17252 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.32□□□□□ -0.12
PRKCAP17252 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
PRKCAP17252 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PRKCAP17252 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCAP17252 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
PRKCAP17252 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCAP17252 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.32□□□□□ -0.12
PRKCAP17252 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PRKCAP17252 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCAP17252 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.32□□□□□ -0.12
PRKCAP17252 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCAP17252 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCAP17252 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCAP17252 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCAP17252 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PRKCAP17252 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCAP17252 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCAP17252 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCAP17252 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCAP17252 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
PRKCAP17252 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCAP17252 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCAP17252 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCAP17252 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCAP17252 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCAP17252 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCAP17252 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCAP17252 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.32□□□□□ -0.12
PRKCAP17252 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.32□□□□□ -0.12
PRKCAP17252 AL512638.1-201ENST00000457493 794 ntBASIC14.32□□□□□ -0.12
PRKCAP17252 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.32□□□□□ -0.12
PRKCAP17252 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCAP17252 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.32□□□□□ -0.12
PRKCAP17252 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.32□□□□□ -0.12
PRKCAP17252 AC009407.1-201ENST00000568958 598 ntBASIC14.32□□□□□ -0.12
PRKCAP17252 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PRKCAP17252 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.32□□□□□ -0.12
PRKCAP17252 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.32□□□□□ -0.12
PRKCAP17252 AC117489.1-201ENST00000625169 3217 ntBASIC14.32□□□□□ -0.12
PRKCAP17252 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCAP17252 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.32□□□□□ -0.12
PRKCAP17252 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.32□□□□□ -0.12
PRKCAP17252 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCAP17252 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
PRKCAP17252 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
PRKCAP17252 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCAP17252 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.32□□□□□ -0.12
PRKCAP17252 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.32□□□□□ -0.12
PRKCAP17252 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCAP17252 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PRKCAP17252 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCAP17252 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PRKCAP17252 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCAP17252 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCAP17252 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.32□□□□□ -0.12
PRKCAP17252 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCAP17252 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCAP17252 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PRKCAP17252 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.32□□□□□ -0.12
PRKCAP17252 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PRKCAP17252 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.31□□□□□ -0.12
PRKCAP17252 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PRKCAP17252 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRKCAP17252 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRKCAP17252 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.31□□□□□ -0.12
PRKCAP17252 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRKCAP17252 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRKCAP17252 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PRKCAP17252 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRKCAP17252 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.31□□□□□ -0.12
PRKCAP17252 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRKCAP17252 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PRKCAP17252 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRKCAP17252 AC022144.1-201ENST00000602255 1580 ntBASIC14.31□□□□□ -0.12
PRKCAP17252 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.31□□□□□ -0.12
PRKCAP17252 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRKCAP17252 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRKCAP17252 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
PRKCAP17252 AC005912.2-201ENST00000619492 2400 ntBASIC14.31□□□□□ -0.12
PRKCAP17252 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PRKCAP17252 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.31□□□□□ -0.12
PRKCAP17252 AC105250.1-201ENST00000509378 2057 ntBASIC14.31□□□□□ -0.12
PRKCAP17252 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRKCAP17252 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PRKCAP17252 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PRKCAP17252 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.31□□□□□ -0.12
PRKCAP17252 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PRKCAP17252 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.31□□□□□ -0.12
PRKCAP17252 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.31□□□□□ -0.12
PRKCAP17252 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.31□□□□□ -0.12
PRKCAP17252 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms