Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HOXB3P14651 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HOXB3P14651 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.21■□□□□ 0.03
HOXB3P14651 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.21■□□□□ 0.03
HOXB3P14651 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HOXB3P14651 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HOXB3P14651 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HOXB3P14651 MCEE-201ENST00000244217 835 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HOXB3P14651 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HOXB3P14651 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.21■□□□□ 0.03
HOXB3P14651 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
HOXB3P14651 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC15.21■□□□□ 0.03
HOXB3P14651 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.21■□□□□ 0.03
HOXB3P14651 RPL13AP19-201ENST00000434320 584 ntBASIC15.21■□□□□ 0.03
HOXB3P14651 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.21■□□□□ 0.03
HOXB3P14651 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.21■□□□□ 0.03
HOXB3P14651 AC005077.2-201ENST00000449786 690 ntBASIC15.21■□□□□ 0.03
HOXB3P14651 FAM86LP-201ENST00000478302 853 ntBASIC15.21■□□□□ 0.03
HOXB3P14651 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HOXB3P14651 AP001528.1-201ENST00000499504 1223 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HOXB3P14651 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HOXB3P14651 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HOXB3P14651 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.21■□□□□ 0.03
HOXB3P14651 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC15.21■□□□□ 0.03
HOXB3P14651 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.21■□□□□ 0.03
HOXB3P14651 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.21■□□□□ 0.03
HOXB3P14651 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HOXB3P14651 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC15.21■□□□□ 0.03
HOXB3P14651 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.21■□□□□ 0.03
HOXB3P14651 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.21■□□□□ 0.03
HOXB3P14651 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.21■□□□□ 0.03
HOXB3P14651 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HOXB3P14651 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.21■□□□□ 0.03
HOXB3P14651 AF230666.2-201ENST00000602328 725 ntBASIC15.21■□□□□ 0.03
HOXB3P14651 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC15.21■□□□□ 0.03
HOXB3P14651 AL162390.1-201ENST00000622201 1246 ntBASIC15.21■□□□□ 0.03
HOXB3P14651 AC093648.1-201ENST00000623546 606 ntBASIC15.21■□□□□ 0.03
HOXB3P14651 AP002371.2-201ENST00000624450 503 ntBASIC15.21■□□□□ 0.03
HOXB3P14651 AC106730.3-201ENST00000624568 641 ntBASIC15.21■□□□□ 0.03
HOXB3P14651 AL732372.1-203ENST00000635159 994 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HOXB3P14651 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.21■□□□□ 0.03
HOXB3P14651 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HOXB3P14651 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.21■□□□□ 0.03
HOXB3P14651 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HOXB3P14651 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.21■□□□□ 0.03
HOXB3P14651 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HOXB3P14651 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.21■□□□□ 0.03
HOXB3P14651 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HOXB3P14651 RIMKLB-213ENST00000619374 1519 ntTSL 5 BASIC15.21■□□□□ 0.03
HOXB3P14651 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HOXB3P14651 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HOXB3P14651 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.21■□□□□ 0.02
HOXB3P14651 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
HOXB3P14651 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HOXB3P14651 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
HOXB3P14651 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HOXB3P14651 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.2■□□□□ 0.02
HOXB3P14651 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HOXB3P14651 AC131649.1-201ENST00000569215 1313 ntBASIC15.2■□□□□ 0.02
HOXB3P14651 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HOXB3P14651 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HOXB3P14651 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.2■□□□□ 0.02
HOXB3P14651 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HOXB3P14651 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HOXB3P14651 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
HOXB3P14651 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HOXB3P14651 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
HOXB3P14651 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HOXB3P14651 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HOXB3P14651 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC15.2■□□□□ 0.02
HOXB3P14651 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HOXB3P14651 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.2■□□□□ 0.02
HOXB3P14651 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HOXB3P14651 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
HOXB3P14651 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
HOXB3P14651 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HOXB3P14651 AL662890.1-201ENST00000396818 632 ntBASIC15.2■□□□□ 0.02
HOXB3P14651 TOMM22P5-201ENST00000416399 439 ntBASIC15.2■□□□□ 0.02
HOXB3P14651 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC15.2■□□□□ 0.02
HOXB3P14651 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.2■□□□□ 0.02
HOXB3P14651 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HOXB3P14651 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
HOXB3P14651 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.2■□□□□ 0.02
HOXB3P14651 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC15.2■□□□□ 0.02
HOXB3P14651 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.2■□□□□ 0.02
HOXB3P14651 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.2■□□□□ 0.02
HOXB3P14651 AC133539.2-201ENST00000604757 467 ntBASIC15.2■□□□□ 0.02
HOXB3P14651 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.2■□□□□ 0.02
HOXB3P14651 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
HOXB3P14651 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.2■□□□□ 0.02
HOXB3P14651 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.2■□□□□ 0.02
HOXB3P14651 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
HOXB3P14651 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.2■□□□□ 0.02
HOXB3P14651 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC15.2■□□□□ 0.02
HOXB3P14651 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HOXB3P14651 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HOXB3P14651 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HOXB3P14651 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HOXB3P14651 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HOXB3P14651 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms