RNA–Protein interactions for RNA: ENST00000573737.1

AC139099.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC139099.1, Length 976 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC139099.1-201ENST00000573737 AEBP2Q6ZN18 517 aaPredicted RBP33.16■■■□□ 2.9
AC139099.1-201ENST00000573737 CHIC1Q5VXU3 224 aa32.33■■■□□ 2.77
AC139099.1-201ENST00000573737 PHF23Q9BUL5 403 aaPredicted RBP28.45■■■□□ 2.14
AC139099.1-201ENST00000573737 SENP3Q9H4L4 574 aaPredicted RBP28.09■■■□□ 2.09
AC139099.1-201ENST00000573737 PLPPR3Q6T4P5 718 aa26.2■■□□□ 1.78
AC139099.1-201ENST00000573737 FOXD1Q16676 465 aa26.11■■□□□ 1.77
AC139099.1-201ENST00000573737 PPP6R1Q9UPN7 881 aa25.11■■□□□ 1.61
AC139099.1-201ENST00000573737 ADRA2BP18089 450 aa25.04■■□□□ 1.6
AC139099.1-201ENST00000573737 PIAS4Q8N2W9 510 aaPredicted RBP24.55■■□□□ 1.52
AC139099.1-201ENST00000573737 MSH5O43196 834 aa24.04■■□□□ 1.44
AC139099.1-201ENST00000573737 PPP4R3CPQ6ZMV5 832 aa23.09■■□□□ 1.29
AC139099.1-201ENST00000573737 SCAF1Q9H7N4 1312 aaKnown RBP22.87■■□□□ 1.25
AC139099.1-201ENST00000573737 MAPK8IP2Q13387 824 aaPredicted RBP22.74■■□□□ 1.23
AC139099.1-201ENST00000573737 KCNA4P22459 653 aa22.53■■□□□ 1.2
AC139099.1-201ENST00000573737 CNKSR2Q8WXI2 1034 aa22.45■■□□□ 1.18
AC139099.1-201ENST00000573737 DMRT2Q9Y5R5 561 aa22.44■■□□□ 1.18
AC139099.1-201ENST00000573737 NCBP3Q53F19 620 aaKnown RBP22.43■■□□□ 1.18
AC139099.1-201ENST00000573737 NPM3O75607 178 aaKnown RBP22.16■■□□□ 1.14
AC139099.1-201ENST00000573737 RNF216Q9NWF9 866 aaPredicted RBP22.03■■□□□ 1.12
AC139099.1-201ENST00000573737 HOXD11P31277 338 aaPredicted RBP21.99■■□□□ 1.11
AC139099.1-201ENST00000573737 POTEDQ86YR6 584 aa21.98■■□□□ 1.11
AC139099.1-201ENST00000573737 DNAJC5BQ9UF47 199 aa21.62■■□□□ 1.05
AC139099.1-201ENST00000573737 SLC4A1APQ9BWU0 796 aaKnown RBP21.41■■□□□ 1.02
AC139099.1-201ENST00000573737 DCAF8L1A6NGE4 600 aa21.35■■□□□ 1.01
AC139099.1-201ENST00000573737 SLC4A2P04920 1241 aa20.97■□□□□ 0.95
AC139099.1-201ENST00000573737 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.85■□□□□ 0.93
AC139099.1-201ENST00000573737 ZBTB22O15209 634 aa20.76■□□□□ 0.91
AC139099.1-201ENST00000573737 FOXD4L1Q9NU39 408 aa20.73■□□□□ 0.91
AC139099.1-201ENST00000573737 EHMT2Q96KQ7 1210 aa20.72■□□□□ 0.91
AC139099.1-201ENST00000573737 RNF39Q9H2S5 420 aa20.64■□□□□ 0.89
AC139099.1-201ENST00000573737 CSRNP3Q8WYN3 585 aa20.61■□□□□ 0.89
AC139099.1-201ENST00000573737 U3KPZ7 1027 aaPredicted RBP20.6■□□□□ 0.89
AC139099.1-201ENST00000573737 MYCNP04198 464 aaPredicted RBP20.45■□□□□ 0.86
AC139099.1-201ENST00000573737 C1QBPQ07021 282 aaKnown RBP20.37■□□□□ 0.85
AC139099.1-201ENST00000573737 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.26■□□□□ 0.83
AC139099.1-201ENST00000573737 HNRNPUL2Q1KMD3 747 aaKnown RBP20.26■□□□□ 0.83
AC139099.1-201ENST00000573737 SAMD1Q6SPF0 538 aaPredicted RBP20.2■□□□□ 0.82
AC139099.1-201ENST00000573737 CACNB1Q02641 598 aaPredicted RBP20.05■□□□□ 0.8
AC139099.1-201ENST00000573737 ATXN8OSP0DMR3 200 aa20.03■□□□□ 0.8
AC139099.1-201ENST00000573737 APLP2Q06481 763 aa20.03■□□□□ 0.8
AC139099.1-201ENST00000573737 SPINK5Q9NQ38 1064 aaPredicted RBP20.01■□□□□ 0.79
AC139099.1-201ENST00000573737 ATF5Q9Y2D1 282 aaPredicted RBP19.95■□□□□ 0.78
AC139099.1-201ENST00000573737 CAPN15O75808 1086 aa19.87■□□□□ 0.77
AC139099.1-201ENST00000573737 ZNF219Q9P2Y4 722 aaPredicted RBP19.8■□□□□ 0.76
AC139099.1-201ENST00000573737 TRHP20396 242 aaPredicted RBP19.77■□□□□ 0.76
AC139099.1-201ENST00000573737 DNAJC5Q9H3Z4 198 aa19.71■□□□□ 0.75
AC139099.1-201ENST00000573737 DSG3P32926 999 aa19.62■□□□□ 0.73
AC139099.1-201ENST00000573737 ABCB7O75027 752 aa19.5■□□□□ 0.71
AC139099.1-201ENST00000573737 POLA2Q14181 598 aa19.48■□□□□ 0.71
AC139099.1-201ENST00000573737 ABCC9O60706 1549 aa19.37■□□□□ 0.69
AC139099.1-201ENST00000573737 ZBTB12Q9Y330 459 aaPredicted RBP19.14■□□□□ 0.65
AC139099.1-201ENST00000573737 MKRN4PQ13434 485 aaPredicted RBP19.09■□□□□ 0.65
AC139099.1-201ENST00000573737 FBLN2P98095 1184 aa19.03■□□□□ 0.64
AC139099.1-201ENST00000573737 OSCARQ8IYS5 282 aa18.82■□□□□ 0.6
AC139099.1-201ENST00000573737 SPDYE2BA6NHP3 402 aa18.65■□□□□ 0.58
AC139099.1-201ENST00000573737 SPDYE6P0CI01 402 aa18.65■□□□□ 0.58
AC139099.1-201ENST00000573737 SPDYE2Q495Y8 402 aa18.65■□□□□ 0.58
AC139099.1-201ENST00000573737 RBM42Q9BTD8 480 aaKnown RBP18.65■□□□□ 0.58
AC139099.1-201ENST00000573737 SPDYE4A6NLX3 237 aa18.59■□□□□ 0.57
AC139099.1-201ENST00000573737 FKBP8Q14318 412 aa18.56■□□□□ 0.56
AC139099.1-201ENST00000573737 NISCHQ9Y2I1 1504 aa18.55■□□□□ 0.56
AC139099.1-201ENST00000573737 ZNF692Q9BU19 519 aaPredicted RBP18.54■□□□□ 0.56
AC139099.1-201ENST00000573737 SSUH2Q9Y2M2 353 aa18.54■□□□□ 0.56
AC139099.1-201ENST00000573737 AKT1S1Q96B36 256 aa18.44■□□□□ 0.54
AC139099.1-201ENST00000573737 PROM2Q8N271 834 aa18.37■□□□□ 0.53
AC139099.1-201ENST00000573737 PABPN1Q86U42 306 aaKnown RBP eCLIP18.3■□□□□ 0.52
AC139099.1-201ENST00000573737 REM2Q8IYK8 340 aaPredicted RBP18.27■□□□□ 0.52
AC139099.1-201ENST00000573737 SPDYE1Q8NFV5 336 aaPredicted RBP18.08■□□□□ 0.48
AC139099.1-201ENST00000573737 PITPNM1O00562 1244 aa18.06■□□□□ 0.48
AC139099.1-201ENST00000573737 TRIM41Q8WV44 630 aa18.02■□□□□ 0.48
AC139099.1-201ENST00000573737 STAG3Q9UJ98 1225 aa17.98■□□□□ 0.47
AC139099.1-201ENST00000573737 CLEC11AQ9Y240 323 aa17.96■□□□□ 0.47
AC139099.1-201ENST00000573737 CHRDL2Q6WN34 429 aa17.9■□□□□ 0.46
AC139099.1-201ENST00000573737 FBXO3Q9UK99 471 aa17.9■□□□□ 0.46
AC139099.1-201ENST00000573737 PRR29P0C7W0 189 aa17.82■□□□□ 0.44
AC139099.1-201ENST00000573737 FXR2P51116 673 aaKnown RBP eCLIP17.76■□□□□ 0.43
AC139099.1-201ENST00000573737 VASPP50552 380 aaPredicted RBP17.69■□□□□ 0.42
AC139099.1-201ENST00000573737 PIP4P2Q8N4L2 257 aa17.68■□□□□ 0.42
AC139099.1-201ENST00000573737 CREBZFQ9NS37 354 aa17.65■□□□□ 0.42
AC139099.1-201ENST00000573737 CECR2Q9BXF3 1484 aa17.64■□□□□ 0.41
AC139099.1-201ENST00000573737 MIER1Q8N108 512 aa17.59■□□□□ 0.41
AC139099.1-201ENST00000573737 PRKAR2AP13861 404 aaKnown RBP17.58■□□□□ 0.4
AC139099.1-201ENST00000573737 CHADLQ6NUI6 762 aa17.57■□□□□ 0.4
AC139099.1-201ENST00000573737 PLCD3Q8N3E9 789 aa17.55■□□□□ 0.4
AC139099.1-201ENST00000573737 RB1CC1Q8TDY2 1594 aa17.5■□□□□ 0.39
AC139099.1-201ENST00000573737 MNX1P50219 401 aaPredicted RBP17.5■□□□□ 0.39
AC139099.1-201ENST00000573737 IFNLR1Q8IU57 520 aaPredicted RBP17.47■□□□□ 0.39
AC139099.1-201ENST00000573737 PLEKHG5O94827 1062 aa17.46■□□□□ 0.39
AC139099.1-201ENST00000573737 CUX2O14529 1486 aa17.44■□□□□ 0.38
AC139099.1-201ENST00000573737 FARP1Q9Y4F1 1045 aaPredicted RBP17.42■□□□□ 0.38
AC139099.1-201ENST00000573737 POTEHQ6S545 545 aa17.38■□□□□ 0.37
AC139099.1-201ENST00000573737 ZBTB47Q9UFB7 747 aaPredicted RBP17.37■□□□□ 0.37
AC139099.1-201ENST00000573737 CCDC180Q9P1Z9 1646 aa17.36■□□□□ 0.37
AC139099.1-201ENST00000573737 CC2D2AQ9P2K1 1620 aa17.36■□□□□ 0.37
AC139099.1-201ENST00000573737 KLHL34Q8N239 644 aa17.32■□□□□ 0.36
AC139099.1-201ENST00000573737 NPM1P06748 294 aaKnown RBP eCLIP17.29■□□□□ 0.36
AC139099.1-201ENST00000573737 ILDR1Q86SU0 546 aaPredicted RBP17.25■□□□□ 0.35
AC139099.1-201ENST00000573737 NUBP1P53384 320 aa17.23■□□□□ 0.35
AC139099.1-201ENST00000573737 SPOCK2Q92563 424 aa17.23■□□□□ 0.35
AC139099.1-201ENST00000573737 BICRAQ9NZM4 1560 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms