Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.05■□□□□ -0
PCNAP12004 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
PCNAP12004 AC044860.1-202ENST00000559481 777 ntBASIC15.05■□□□□ -0
PCNAP12004 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.05■□□□□ -0
PCNAP12004 GPALPP1-207ENST00000611650 899 ntBASIC15.05■□□□□ -0
PCNAP12004 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.05■□□□□ -0
PCNAP12004 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.05■□□□□ -0
PCNAP12004 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.05■□□□□ -0
PCNAP12004 AL390754.1-201ENST00000619088 582 ntBASIC15.05■□□□□ -0
PCNAP12004 AC087499.5-201ENST00000452760 1342 ntBASIC15.05■□□□□ -0
PCNAP12004 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.05■□□□□ -0
PCNAP12004 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.05■□□□□ -0
PCNAP12004 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.05■□□□□ -0
PCNAP12004 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ -0
PCNAP12004 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PCNAP12004 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PCNAP12004 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PCNAP12004 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.05■□□□□ -0
PCNAP12004 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
PCNAP12004 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
PCNAP12004 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.05■□□□□ -0
PCNAP12004 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
PCNAP12004 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.05■□□□□ -0
PCNAP12004 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.05■□□□□ -0
PCNAP12004 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.05■□□□□ -0
PCNAP12004 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
PCNAP12004 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PCNAP12004 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.05■□□□□ -0
PCNAP12004 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PCNAP12004 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCNAP12004 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PCNAP12004 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
PCNAP12004 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCNAP12004 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCNAP12004 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.04■□□□□ -0
PCNAP12004 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCNAP12004 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCNAP12004 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCNAP12004 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PCNAP12004 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
PCNAP12004 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCNAP12004 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCNAP12004 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCNAP12004 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCNAP12004 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCNAP12004 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.04■□□□□ -0
PCNAP12004 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PCNAP12004 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
PCNAP12004 KRT8P44-201ENST00000441609 1350 ntBASIC15.04■□□□□ -0
PCNAP12004 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
PCNAP12004 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PCNAP12004 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PCNAP12004 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCNAP12004 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
PCNAP12004 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCNAP12004 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCNAP12004 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.04■□□□□ -0
PCNAP12004 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.04■□□□□ -0
PCNAP12004 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCNAP12004 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.04■□□□□ -0
PCNAP12004 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.04■□□□□ -0
PCNAP12004 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.04■□□□□ -0
PCNAP12004 SDHAP3-202ENST00000515467 728 ntBASIC15.04■□□□□ -0
PCNAP12004 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.04■□□□□ -0
PCNAP12004 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.04■□□□□ -0
PCNAP12004 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.04■□□□□ -0
PCNAP12004 AC093512.1-201ENST00000617969 520 ntBASIC15.04■□□□□ -0
PCNAP12004 AL590560.3-201ENST00000623350 461 ntBASIC15.04■□□□□ -0
PCNAP12004 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.04■□□□□ -0
PCNAP12004 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
PCNAP12004 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCNAP12004 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
PCNAP12004 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.04■□□□□ -0
PCNAP12004 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
PCNAP12004 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCNAP12004 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PCNAP12004 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.04■□□□□ -0
PCNAP12004 AC023024.2-201ENST00000623561 1993 ntBASIC15.04■□□□□ -0
PCNAP12004 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCNAP12004 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PCNAP12004 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PCNAP12004 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCNAP12004 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCNAP12004 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PCNAP12004 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCNAP12004 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCNAP12004 AC084364.1-201ENST00000551967 1556 ntBASIC15.03■□□□□ -0
PCNAP12004 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PCNAP12004 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
PCNAP12004 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCNAP12004 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCNAP12004 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PCNAP12004 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.03■□□□□ -0
PCNAP12004 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PCNAP12004 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
PCNAP12004 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
PCNAP12004 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCNAP12004 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PCNAP12004 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCNAP12004 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms