Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBP1P09455 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.18■□□□□ 0.02
RBP1P09455 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.18■□□□□ 0.02
RBP1P09455 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
RBP1P09455 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBP1P09455 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBP1P09455 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBP1P09455 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RBP1P09455 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBP1P09455 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
RBP1P09455 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBP1P09455 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RBP1P09455 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBP1P09455 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
RBP1P09455 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBP1P09455 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBP1P09455 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RBP1P09455 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBP1P09455 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBP1P09455 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RBP1P09455 AC140479.7-201ENST00000636301 2332 ntBASIC15.17■□□□□ 0.02
RBP1P09455 AC005912.2-201ENST00000619492 2400 ntBASIC15.17■□□□□ 0.02
RBP1P09455 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBP1P09455 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBP1P09455 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RBP1P09455 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBP1P09455 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.17■□□□□ 0.02
RBP1P09455 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RBP1P09455 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RBP1P09455 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RBP1P09455 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.17■□□□□ 0.02
RBP1P09455 HLA-J-203ENST00000494367 1087 ntBASIC15.17■□□□□ 0.02
RBP1P09455 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.17■□□□□ 0.02
RBP1P09455 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.17■□□□□ 0.02
RBP1P09455 SNHG9-202ENST00000564014 471 ntBASIC15.17■□□□□ 0.02
RBP1P09455 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.17■□□□□ 0.02
RBP1P09455 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.17■□□□□ 0.02
RBP1P09455 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.17■□□□□ 0.02
RBP1P09455 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBP1P09455 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
RBP1P09455 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBP1P09455 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RBP1P09455 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.17■□□□□ 0.02
RBP1P09455 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.17■□□□□ 0.02
RBP1P09455 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RBP1P09455 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RBP1P09455 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBP1P09455 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RBP1P09455 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RBP1P09455 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBP1P09455 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBP1P09455 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBP1P09455 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBP1P09455 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBP1P09455 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
RBP1P09455 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBP1P09455 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RBP1P09455 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBP1P09455 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBP1P09455 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RBP1P09455 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.16■□□□□ 0.02
RBP1P09455 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBP1P09455 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
RBP1P09455 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBP1P09455 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.16■□□□□ 0.02
RBP1P09455 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.16■□□□□ 0.02
RBP1P09455 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBP1P09455 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RBP1P09455 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBP1P09455 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RBP1P09455 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBP1P09455 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RBP1P09455 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.16■□□□□ 0.02
RBP1P09455 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RBP1P09455 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBP1P09455 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RBP1P09455 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RBP1P09455 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RBP1P09455 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RBP1P09455 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBP1P09455 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBP1P09455 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RBP1P09455 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RBP1P09455 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.16■□□□□ 0.02
RBP1P09455 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.16■□□□□ 0.02
RBP1P09455 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.16■□□□□ 0.02
RBP1P09455 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.16■□□□□ 0.02
RBP1P09455 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.16■□□□□ 0.02
RBP1P09455 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
RBP1P09455 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.16■□□□□ 0.02
RBP1P09455 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.16■□□□□ 0.02
RBP1P09455 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.16■□□□□ 0.02
RBP1P09455 AC010336.2-201ENST00000564226 506 ntBASIC15.16■□□□□ 0.02
RBP1P09455 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.16■□□□□ 0.02
RBP1P09455 AL138828.2-201ENST00000615812 383 ntBASIC15.16■□□□□ 0.02
RBP1P09455 SPDYE12P-201ENST00000618416 771 ntBASIC15.16■□□□□ 0.02
RBP1P09455 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.16■□□□□ 0.02
RBP1P09455 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.16■□□□□ 0.02
RBP1P09455 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.16■□□□□ 0.02
RBP1P09455 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms