Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNX4O95219 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNX4O95219 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SNX4O95219 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNX4O95219 AZGP1P1-201ENST00000411909 902 ntBASIC14.54□□□□□ -0.08
SNX4O95219 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SNX4O95219 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.54□□□□□ -0.08
SNX4O95219 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNX4O95219 TIMM17BP1-201ENST00000545713 516 ntBASIC14.54□□□□□ -0.08
SNX4O95219 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
SNX4O95219 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.54□□□□□ -0.08
SNX4O95219 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.54□□□□□ -0.08
SNX4O95219 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.54□□□□□ -0.08
SNX4O95219 AC004233.3-201ENST00000607794 1269 ntBASIC14.54□□□□□ -0.08
SNX4O95219 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
SNX4O95219 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SNX4O95219 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SNX4O95219 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNX4O95219 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SNX4O95219 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNX4O95219 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNX4O95219 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SNX4O95219 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNX4O95219 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNX4O95219 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNX4O95219 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNX4O95219 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SNX4O95219 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
SNX4O95219 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNX4O95219 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SNX4O95219 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SNX4O95219 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNX4O95219 CICP14-201ENST00000629111 2732 ntBASIC14.53□□□□□ -0.08
SNX4O95219 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SNX4O95219 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNX4O95219 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNX4O95219 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.53□□□□□ -0.08
SNX4O95219 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNX4O95219 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNX4O95219 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNX4O95219 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNX4O95219 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SNX4O95219 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.53□□□□□ -0.08
SNX4O95219 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.53□□□□□ -0.08
SNX4O95219 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.53□□□□□ -0.08
SNX4O95219 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.53□□□□□ -0.08
SNX4O95219 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.53□□□□□ -0.08
SNX4O95219 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.53□□□□□ -0.08
SNX4O95219 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SNX4O95219 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.53□□□□□ -0.08
SNX4O95219 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.53□□□□□ -0.08
SNX4O95219 SERBP1P5-201ENST00000510079 1181 ntBASIC14.53□□□□□ -0.08
SNX4O95219 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SNX4O95219 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.53□□□□□ -0.08
SNX4O95219 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SNX4O95219 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.53□□□□□ -0.08
SNX4O95219 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.53□□□□□ -0.08
SNX4O95219 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.53□□□□□ -0.08
SNX4O95219 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.53□□□□□ -0.08
SNX4O95219 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
SNX4O95219 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SNX4O95219 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SNX4O95219 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.53□□□□□ -0.08
SNX4O95219 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.53□□□□□ -0.08
SNX4O95219 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.53□□□□□ -0.08
SNX4O95219 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.53□□□□□ -0.08
SNX4O95219 AC004840.1-201ENST00000636359 365 ntBASIC14.53□□□□□ -0.08
SNX4O95219 AL109936.8-201ENST00000641772 604 ntBASIC14.53□□□□□ -0.08
SNX4O95219 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNX4O95219 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.53□□□□□ -0.08
SNX4O95219 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNX4O95219 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNX4O95219 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SNX4O95219 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNX4O95219 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNX4O95219 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNX4O95219 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SNX4O95219 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.53□□□□□ -0.08
SNX4O95219 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.53□□□□□ -0.08
SNX4O95219 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNX4O95219 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.53□□□□□ -0.08
SNX4O95219 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNX4O95219 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SNX4O95219 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.52□□□□□ -0.08
SNX4O95219 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
SNX4O95219 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
SNX4O95219 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.52□□□□□ -0.08
SNX4O95219 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.52□□□□□ -0.08
SNX4O95219 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SNX4O95219 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.52□□□□□ -0.08
SNX4O95219 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.52□□□□□ -0.08
SNX4O95219 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SNX4O95219 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SNX4O95219 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.52□□□□□ -0.08
SNX4O95219 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SNX4O95219 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
SNX4O95219 AC013726.1-201ENST00000563747 2285 ntBASIC14.52□□□□□ -0.08
SNX4O95219 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
SNX4O95219 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
SNX4O95219 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 289.4 ms