Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LTN1O94822 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
LTN1O94822 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LTN1O94822 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LTN1O94822 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LTN1O94822 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LTN1O94822 DOC2GP-204ENST00000639052 2548 ntBASIC19.83■□□□□ 0.76
LTN1O94822 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LTN1O94822 RPSAP31-201ENST00000416648 895 ntBASIC19.83■□□□□ 0.76
LTN1O94822 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LTN1O94822 PTPA-215ENST00000432124 567 ntTSL 4 BASIC19.83■□□□□ 0.76
LTN1O94822 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LTN1O94822 LY6E-208ENST00000520531 490 ntTSL 2 BASIC19.83■□□□□ 0.76
LTN1O94822 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
LTN1O94822 CFL1-206ENST00000527344 962 ntTSL 2 BASIC19.83■□□□□ 0.76
LTN1O94822 AL022334.2-201ENST00000610000 484 ntBASIC19.83■□□□□ 0.76
LTN1O94822 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC19.83■□□□□ 0.76
LTN1O94822 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LTN1O94822 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LTN1O94822 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC19.82■□□□□ 0.76
LTN1O94822 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC19.82■□□□□ 0.76
LTN1O94822 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC19.82■□□□□ 0.76
LTN1O94822 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
LTN1O94822 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LTN1O94822 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC19.82■□□□□ 0.76
LTN1O94822 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LTN1O94822 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LTN1O94822 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
LTN1O94822 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LTN1O94822 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.82■□□□□ 0.76
LTN1O94822 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LTN1O94822 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LTN1O94822 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LTN1O94822 AC026316.1-201ENST00000398900 414 ntBASIC19.82■□□□□ 0.76
LTN1O94822 AL627389.1-201ENST00000413508 1182 ntBASIC19.82■□□□□ 0.76
LTN1O94822 AC098935.1-201ENST00000446057 611 ntBASIC19.82■□□□□ 0.76
LTN1O94822 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC19.82■□□□□ 0.76
LTN1O94822 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
LTN1O94822 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC19.82■□□□□ 0.76
LTN1O94822 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC19.82■□□□□ 0.76
LTN1O94822 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC19.82■□□□□ 0.76
LTN1O94822 COX6A1P2-201ENST00000620597 330 ntBASIC19.82■□□□□ 0.76
LTN1O94822 AC011491.1-203ENST00000637688 543 ntBASIC19.82■□□□□ 0.76
LTN1O94822 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LTN1O94822 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC19.82■□□□□ 0.76
LTN1O94822 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LTN1O94822 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC19.82■□□□□ 0.76
LTN1O94822 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LTN1O94822 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LTN1O94822 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LTN1O94822 KRT8P31-201ENST00000504812 1408 ntBASIC19.81■□□□□ 0.76
LTN1O94822 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.81■□□□□ 0.76
LTN1O94822 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LTN1O94822 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC19.81■□□□□ 0.76
LTN1O94822 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC19.81■□□□□ 0.76
LTN1O94822 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC19.81■□□□□ 0.76
LTN1O94822 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LTN1O94822 SOD2-202ENST00000367054 815 ntTSL 2 BASIC19.81■□□□□ 0.76
LTN1O94822 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LTN1O94822 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LTN1O94822 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC19.81■□□□□ 0.76
LTN1O94822 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC19.81■□□□□ 0.76
LTN1O94822 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC19.81■□□□□ 0.76
LTN1O94822 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC19.81■□□□□ 0.76
LTN1O94822 NEU3-205ENST00000531619 582 ntTSL 5 BASIC19.81■□□□□ 0.76
LTN1O94822 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
LTN1O94822 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
LTN1O94822 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC19.81■□□□□ 0.76
LTN1O94822 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LTN1O94822 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LTN1O94822 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC19.81■□□□□ 0.76
LTN1O94822 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LTN1O94822 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC19.81■□□□□ 0.76
LTN1O94822 AC144522.1-201ENST00000625111 1658 ntBASIC19.81■□□□□ 0.76
LTN1O94822 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LTN1O94822 AC007292.2-201ENST00000593524 1812 ntBASIC19.81■□□□□ 0.76
LTN1O94822 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LTN1O94822 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LTN1O94822 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
LTN1O94822 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
LTN1O94822 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LTN1O94822 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LTN1O94822 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
LTN1O94822 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC19.8■□□□□ 0.76
LTN1O94822 TMCO5B-205ENST00000530020 894 ntBASIC19.8■□□□□ 0.76
LTN1O94822 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
LTN1O94822 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC19.8■□□□□ 0.76
LTN1O94822 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LTN1O94822 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC19.8■□□□□ 0.76
LTN1O94822 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC19.8■□□□□ 0.76
LTN1O94822 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC19.8■□□□□ 0.76
LTN1O94822 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LTN1O94822 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LTN1O94822 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
LTN1O94822 KRT8P28-201ENST00000433288 1390 ntBASIC19.8■□□□□ 0.76
LTN1O94822 LTB4R2-202ENST00000528054 3092 ntBASIC19.8■□□□□ 0.76
LTN1O94822 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LTN1O94822 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
LTN1O94822 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LTN1O94822 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms