Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCNKO75909 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCNKO75909 STRCP1-201ENST00000509801 5328 ntBASIC13.37□□□□□ -0.27
CCNKO75909 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCNKO75909 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCNKO75909 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCNKO75909 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.37□□□□□ -0.27
CCNKO75909 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCNKO75909 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.37□□□□□ -0.27
CCNKO75909 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCNKO75909 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCNKO75909 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.37□□□□□ -0.27
CCNKO75909 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
CCNKO75909 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC13.37□□□□□ -0.27
CCNKO75909 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCNKO75909 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCNKO75909 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13.37□□□□□ -0.27
CCNKO75909 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCNKO75909 AP005901.3-202ENST00000581653 237 ntBASIC13.37□□□□□ -0.27
CCNKO75909 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.37□□□□□ -0.27
CCNKO75909 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.37□□□□□ -0.27
CCNKO75909 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.37□□□□□ -0.27
CCNKO75909 CYP2A7P1-201ENST00000595391 815 ntBASIC13.37□□□□□ -0.27
CCNKO75909 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCNKO75909 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
CCNKO75909 MEX3B-202ENST00000558133 4333 ntBASIC13.37□□□□□ -0.27
CCNKO75909 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCNKO75909 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCNKO75909 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CCNKO75909 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCNKO75909 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CCNKO75909 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCNKO75909 AC073508.3-201ENST00000619697 1419 ntBASIC13.37□□□□□ -0.27
CCNKO75909 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CCNKO75909 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CCNKO75909 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCNKO75909 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CCNKO75909 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCNKO75909 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.36□□□□□ -0.27
CCNKO75909 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.36□□□□□ -0.27
CCNKO75909 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CCNKO75909 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CCNKO75909 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.36□□□□□ -0.27
CCNKO75909 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC13.36□□□□□ -0.27
CCNKO75909 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.36□□□□□ -0.27
CCNKO75909 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.36□□□□□ -0.27
CCNKO75909 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.36□□□□□ -0.27
CCNKO75909 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC13.36□□□□□ -0.27
CCNKO75909 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 AL596275.1-201ENST00000423464 877 ntBASIC13.36□□□□□ -0.27
CCNKO75909 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.36□□□□□ -0.27
CCNKO75909 SIGLEC30P-201ENST00000455569 941 ntBASIC13.36□□□□□ -0.27
CCNKO75909 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 AC006011.2-201ENST00000621313 1158 ntBASIC13.36□□□□□ -0.27
CCNKO75909 TMEM191A-211ENST00000637163 1067 ntBASIC13.36□□□□□ -0.27
CCNKO75909 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CCNKO75909 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC13.36□□□□□ -0.27
CCNKO75909 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CCNKO75909 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 PMPCAP1-201ENST00000508114 1576 ntBASIC13.36□□□□□ -0.27
CCNKO75909 KRT8P24-201ENST00000560290 1559 ntBASIC13.36□□□□□ -0.27
CCNKO75909 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
CCNKO75909 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.36□□□□□ -0.27
CCNKO75909 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC13.36□□□□□ -0.27
CCNKO75909 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCNKO75909 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCNKO75909 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCNKO75909 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CCNKO75909 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCNKO75909 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms