Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.1■□□□□ 0.01
CDC7O00311 MRPS18AP1-201ENST00000414458 589 ntBASIC15.1■□□□□ 0.01
CDC7O00311 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.1■□□□□ 0.01
CDC7O00311 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.1■□□□□ 0.01
CDC7O00311 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.1■□□□□ 0.01
CDC7O00311 AC092183.1-201ENST00000469884 875 ntBASIC15.1■□□□□ 0.01
CDC7O00311 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.1■□□□□ 0.01
CDC7O00311 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.1■□□□□ 0.01
CDC7O00311 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC7O00311 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.1■□□□□ 0.01
CDC7O00311 AC104794.3-201ENST00000566840 1248 ntBASIC15.1■□□□□ 0.01
CDC7O00311 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.1■□□□□ 0.01
CDC7O00311 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.1■□□□□ 0.01
CDC7O00311 AC005498.2-205ENST00000593218 784 ntBASIC15.1■□□□□ 0.01
CDC7O00311 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CDC7O00311 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.1■□□□□ 0.01
CDC7O00311 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC7O00311 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDC7O00311 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC7O00311 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
CDC7O00311 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC7O00311 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC7O00311 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC7O00311 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CDC7O00311 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDC7O00311 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.1■□□□□ 0.01
CDC7O00311 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC7O00311 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC7O00311 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
CDC7O00311 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC7O00311 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDC7O00311 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDC7O00311 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CDC7O00311 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDC7O00311 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.09■□□□□ 0.01
CDC7O00311 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CDC7O00311 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC7O00311 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.09■□□□□ 0.01
CDC7O00311 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.09■□□□□ 0.01
CDC7O00311 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC7O00311 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC7O00311 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.09■□□□□ 0.01
CDC7O00311 AL512638.1-201ENST00000457493 794 ntBASIC15.09■□□□□ 0.01
CDC7O00311 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.09■□□□□ 0.01
CDC7O00311 AC093214.1-201ENST00000511688 1107 ntBASIC15.09■□□□□ 0.01
CDC7O00311 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.09■□□□□ 0.01
CDC7O00311 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.09■□□□□ 0.01
CDC7O00311 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.09■□□□□ 0.01
CDC7O00311 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.09■□□□□ 0.01
CDC7O00311 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.09■□□□□ 0.01
CDC7O00311 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.09■□□□□ 0.01
CDC7O00311 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC7O00311 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CDC7O00311 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CDC7O00311 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC7O00311 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC7O00311 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC7O00311 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CDC7O00311 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDC7O00311 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.09■□□□□ 0.01
CDC7O00311 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC7O00311 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.09■□□□□ 0.01
CDC7O00311 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CDC7O00311 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC7O00311 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
CDC7O00311 AL161772.1-201ENST00000610494 4412 ntBASIC15.09■□□□□ 0.01
CDC7O00311 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC7O00311 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC7O00311 AL390755.1-201ENST00000623716 2027 ntBASIC15.09■□□□□ 0.01
CDC7O00311 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC7O00311 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC7O00311 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
CDC7O00311 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CDC7O00311 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
CDC7O00311 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
CDC7O00311 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.08■□□□□ 0.01
CDC7O00311 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.08■□□□□ 0.01
CDC7O00311 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
CDC7O00311 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.08■□□□□ 0.01
CDC7O00311 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CDC7O00311 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CDC7O00311 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CDC7O00311 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDC7O00311 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CDC7O00311 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDC7O00311 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDC7O00311 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CDC7O00311 AL136379.1-201ENST00000623471 2642 ntBASIC15.08■□□□□ 0
CDC7O00311 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDC7O00311 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.08■□□□□ 0
CDC7O00311 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.08■□□□□ 0
CDC7O00311 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
CDC7O00311 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CDC7O00311 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDC7O00311 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDC7O00311 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.08■□□□□ 0
CDC7O00311 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDC7O00311 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.08■□□□□ 0
CDC7O00311 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.08■□□□□ 0
CDC7O00311 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms