Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 MIR3687-2-201ENST00000577708 61 ntBASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 MIR3687-1-201ENST00000614492 61 ntBASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 AC009093.7-201ENST00000623853 1223 ntBASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 AC012508.2-201ENST00000567613 1472 ntBASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 USP35-204ENST00000530267 2419 ntTSL 2 BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 AC005912.2-201ENST00000619492 2400 ntBASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LINC00959A0A1B0GUT2 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 Z97205.2-201ENST00000564697 1639 ntBASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 COA5-202ENST00000409997 557 ntTSL 4 BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 AC074338.1-201ENST00000416825 156 ntBASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 AC023141.5-201ENST00000458585 616 ntBASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC10.51□□□□□ -0.73
LINC00959A0A1B0GUT2 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms