Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDC42BPBQ9Y5S2 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CDC42BPBQ9Y5S2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.54■■□□□ 1.2
CDC42BPBQ9Y5S2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDC42BPBQ9Y5S2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
CDC42BPBQ9Y5S2 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDC42BPBQ9Y5S2 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDC42BPBQ9Y5S2 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
CDC42BPBQ9Y5S2 AC097065.1-201ENST00000425737 517 ntBASIC22.54■■□□□ 1.2
CDC42BPBQ9Y5S2 AL627422.1-201ENST00000434104 580 ntBASIC22.54■■□□□ 1.2
CDC42BPBQ9Y5S2 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
CDC42BPBQ9Y5S2 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC22.54■■□□□ 1.2
CDC42BPBQ9Y5S2 AC027237.1-201ENST00000560942 655 ntBASIC22.54■■□□□ 1.2
CDC42BPBQ9Y5S2 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDC42BPBQ9Y5S2 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC22.54■■□□□ 1.2
CDC42BPBQ9Y5S2 AC009145.4-201ENST00000625119 1294 ntBASIC22.54■■□□□ 1.2
CDC42BPBQ9Y5S2 KRT8P28-201ENST00000433288 1390 ntBASIC22.54■■□□□ 1.2
CDC42BPBQ9Y5S2 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC22.53■■□□□ 1.2
CDC42BPBQ9Y5S2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDC42BPBQ9Y5S2 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDC42BPBQ9Y5S2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDC42BPBQ9Y5S2 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC22.53■■□□□ 1.2
CDC42BPBQ9Y5S2 KRT18P9-201ENST00000604826 1300 ntBASIC22.53■■□□□ 1.2
CDC42BPBQ9Y5S2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDC42BPBQ9Y5S2 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDC42BPBQ9Y5S2 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC22.53■■□□□ 1.2
CDC42BPBQ9Y5S2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.53■■□□□ 1.2
CDC42BPBQ9Y5S2 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDC42BPBQ9Y5S2 PIN4P1-201ENST00000451079 396 ntBASIC22.53■■□□□ 1.2
CDC42BPBQ9Y5S2 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC22.53■■□□□ 1.2
CDC42BPBQ9Y5S2 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC22.53■■□□□ 1.2
CDC42BPBQ9Y5S2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC22.53■■□□□ 1.2
CDC42BPBQ9Y5S2 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC22.53■■□□□ 1.2
CDC42BPBQ9Y5S2 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDC42BPBQ9Y5S2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDC42BPBQ9Y5S2 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDC42BPBQ9Y5S2 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDC42BPBQ9Y5S2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
CDC42BPBQ9Y5S2 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDC42BPBQ9Y5S2 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC22.52■■□□□ 1.2
CDC42BPBQ9Y5S2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPBQ9Y5S2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
CDC42BPBQ9Y5S2 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPBQ9Y5S2 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC22.52■■□□□ 1.2
CDC42BPBQ9Y5S2 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC22.52■■□□□ 1.2
CDC42BPBQ9Y5S2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPBQ9Y5S2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPBQ9Y5S2 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPBQ9Y5S2 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CDC42BPBQ9Y5S2 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPBQ9Y5S2 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPBQ9Y5S2 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC22.52■■□□□ 1.2
CDC42BPBQ9Y5S2 AC026410.1-201ENST00000507366 1101 ntBASIC22.52■■□□□ 1.2
CDC42BPBQ9Y5S2 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPBQ9Y5S2 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPBQ9Y5S2 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
CDC42BPBQ9Y5S2 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPBQ9Y5S2 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC22.52■■□□□ 1.2
CDC42BPBQ9Y5S2 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPBQ9Y5S2 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDC42BPBQ9Y5S2 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC22.52■■□□□ 1.19
CDC42BPBQ9Y5S2 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPBQ9Y5S2 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPBQ9Y5S2 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC22.51■■□□□ 1.19
CDC42BPBQ9Y5S2 AL357563.1-201ENST00000404728 395 ntBASIC22.51■■□□□ 1.19
CDC42BPBQ9Y5S2 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC22.51■■□□□ 1.19
CDC42BPBQ9Y5S2 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPBQ9Y5S2 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPBQ9Y5S2 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
CDC42BPBQ9Y5S2 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPBQ9Y5S2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPBQ9Y5S2 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPBQ9Y5S2 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPBQ9Y5S2 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC22.51■■□□□ 1.19
CDC42BPBQ9Y5S2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPBQ9Y5S2 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
CDC42BPBQ9Y5S2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC22.51■■□□□ 1.19
CDC42BPBQ9Y5S2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPBQ9Y5S2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPBQ9Y5S2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPBQ9Y5S2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPBQ9Y5S2 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC22.51■■□□□ 1.19
CDC42BPBQ9Y5S2 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC22.51■■□□□ 1.19
CDC42BPBQ9Y5S2 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC22.51■■□□□ 1.19
CDC42BPBQ9Y5S2 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDC42BPBQ9Y5S2 CHCHD2P9-201ENST00000461726 456 ntBASIC22.51■■□□□ 1.19
CDC42BPBQ9Y5S2 POLD4-208ENST00000532830 904 ntTSL 3 BASIC22.51■■□□□ 1.19
CDC42BPBQ9Y5S2 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC22.51■■□□□ 1.19
CDC42BPBQ9Y5S2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CDC42BPBQ9Y5S2 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDC42BPBQ9Y5S2 MROH4P-201ENST00000431302 1578 ntBASIC22.5■■□□□ 1.19
CDC42BPBQ9Y5S2 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
CDC42BPBQ9Y5S2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CDC42BPBQ9Y5S2 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CDC42BPBQ9Y5S2 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CDC42BPBQ9Y5S2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
CDC42BPBQ9Y5S2 STX6-204ENST00000542060 4809 ntTSL 2 BASIC22.5■■□□□ 1.19
CDC42BPBQ9Y5S2 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDC42BPBQ9Y5S2 TSPY25P-201ENST00000429463 745 ntBASIC22.5■■□□□ 1.19
CDC42BPBQ9Y5S2 AC026320.2-201ENST00000434379 478 ntBASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms