Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSX2IPQ9Y2D8 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSX2IPQ9Y2D8 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSX2IPQ9Y2D8 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.59■□□□□ 0.25
SSX2IPQ9Y2D8 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.59■□□□□ 0.25
SSX2IPQ9Y2D8 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.59■□□□□ 0.25
SSX2IPQ9Y2D8 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSX2IPQ9Y2D8 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSX2IPQ9Y2D8 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.59■□□□□ 0.25
SSX2IPQ9Y2D8 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSX2IPQ9Y2D8 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SSX2IPQ9Y2D8 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SSX2IPQ9Y2D8 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SSX2IPQ9Y2D8 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
SSX2IPQ9Y2D8 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
SSX2IPQ9Y2D8 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
SSX2IPQ9Y2D8 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.58■□□□□ 0.25
SSX2IPQ9Y2D8 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SSX2IPQ9Y2D8 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SSX2IPQ9Y2D8 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 MIR6787-201ENST00000616675 61 ntBASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 KRT8P44-201ENST00000441609 1350 ntBASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 C8orf49-201ENST00000525043 1968 ntBASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSX2IPQ9Y2D8 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 TSPY26P-202ENST00000565928 3884 ntBASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 AC024909.3-201ENST00000611513 2257 ntBASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 AL365203.3-201ENST00000609742 2057 ntBASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 AC020907.1-201ENST00000616460 1350 ntBASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 CNN2P8-201ENST00000421872 913 ntBASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SSX2IPQ9Y2D8 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms