Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 PRSS30P-206ENST00000641773 873 ntBASIC16.36■□□□□ 0.21
CISHQ9NSE2 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CISHQ9NSE2 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CISHQ9NSE2 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.36■□□□□ 0.21
CISHQ9NSE2 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CISHQ9NSE2 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CISHQ9NSE2 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CISHQ9NSE2 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CISHQ9NSE2 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CISHQ9NSE2 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CISHQ9NSE2 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CISHQ9NSE2 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CISHQ9NSE2 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CISHQ9NSE2 REXO1L5P-201ENST00000622260 2098 ntBASIC16.36■□□□□ 0.21
CISHQ9NSE2 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.36■□□□□ 0.21
CISHQ9NSE2 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.36■□□□□ 0.21
CISHQ9NSE2 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CISHQ9NSE2 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CISHQ9NSE2 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CISHQ9NSE2 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CISHQ9NSE2 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.35■□□□□ 0.21
CISHQ9NSE2 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CISHQ9NSE2 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CISHQ9NSE2 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CISHQ9NSE2 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CISHQ9NSE2 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
CISHQ9NSE2 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CISHQ9NSE2 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CISHQ9NSE2 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.35■□□□□ 0.21
CISHQ9NSE2 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CISHQ9NSE2 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CISHQ9NSE2 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.35■□□□□ 0.21
CISHQ9NSE2 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CISHQ9NSE2 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CISHQ9NSE2 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CISHQ9NSE2 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.35■□□□□ 0.21
CISHQ9NSE2 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CISHQ9NSE2 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CISHQ9NSE2 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CISHQ9NSE2 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CISHQ9NSE2 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.35■□□□□ 0.21
CISHQ9NSE2 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.35■□□□□ 0.21
CISHQ9NSE2 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CISHQ9NSE2 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.35■□□□□ 0.21
CISHQ9NSE2 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.35■□□□□ 0.21
CISHQ9NSE2 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CISHQ9NSE2 AP001063.1-201ENST00000568332 529 ntBASIC16.35■□□□□ 0.21
CISHQ9NSE2 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CISHQ9NSE2 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.35■□□□□ 0.21
CISHQ9NSE2 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CISHQ9NSE2 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.35■□□□□ 0.21
CISHQ9NSE2 RPSAP52-203ENST00000622976 1023 ntBASIC16.35■□□□□ 0.21
CISHQ9NSE2 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CISHQ9NSE2 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
CISHQ9NSE2 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CISHQ9NSE2 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CISHQ9NSE2 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CISHQ9NSE2 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CISHQ9NSE2 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CISHQ9NSE2 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CISHQ9NSE2 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CISHQ9NSE2 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CISHQ9NSE2 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CISHQ9NSE2 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CISHQ9NSE2 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CISHQ9NSE2 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
CISHQ9NSE2 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CISHQ9NSE2 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CISHQ9NSE2 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.35■□□□□ 0.21
CISHQ9NSE2 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CISHQ9NSE2 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CISHQ9NSE2 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CISHQ9NSE2 TNRC18P2-201ENST00000417666 2714 ntBASIC16.34■□□□□ 0.21
CISHQ9NSE2 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CISHQ9NSE2 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CISHQ9NSE2 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CISHQ9NSE2 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CISHQ9NSE2 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CISHQ9NSE2 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CISHQ9NSE2 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CISHQ9NSE2 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 HLA-K-203ENST00000430151 1046 ntBASIC16.34■□□□□ 0.21
CISHQ9NSE2 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CISHQ9NSE2 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CISHQ9NSE2 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CISHQ9NSE2 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.34■□□□□ 0.21
CISHQ9NSE2 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms