Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 AL513480.1-201ENST00000451731 511 ntBASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 AC104692.2-201ENST00000603054 253 ntBASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 PMS2P7-201ENST00000506558 1336 ntBASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHMP6Q96FZ7 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 CRYGEP-201ENST00000412192 528 ntBASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 AL450472.2-201ENST00000603663 1156 ntBASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 AC018442.1-201ENST00000421439 2061 ntBASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.56■□□□□ 0.08
CHMP6Q96FZ7 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 AP000845.1-201ENST00000581677 2131 ntBASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 FAM185BP-201ENST00000443595 716 ntBASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 AC009078.2-202ENST00000463353 338 ntBASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 CXCL1P1-201ENST00000502804 216 ntBASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 UNC93B6-202ENST00000528242 690 ntBASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 AL031432.2-201ENST00000566714 459 ntBASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 AL928711.1-201ENST00000570165 459 ntBASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 AL078644.1-201ENST00000609881 752 ntBASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 AL645728.2-201ENST00000641974 660 ntBASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHMP6Q96FZ7 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms