Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
FNDC9Q8TBE3 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 AC009090.5-201ENST00000624886 2285 ntBASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 AC022532.1-201ENST00000624563 1728 ntBASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 TMEM14DP-201ENST00000422205 345 ntBASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 DRD5P1-201ENST00000456605 1438 ntBASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
FNDC9Q8TBE3 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FNDC9Q8TBE3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.87□□□□□ -0.19
FNDC9Q8TBE3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.87□□□□□ -0.19
FNDC9Q8TBE3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.87□□□□□ -0.19
FNDC9Q8TBE3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
FNDC9Q8TBE3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FNDC9Q8TBE3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.87□□□□□ -0.19
FNDC9Q8TBE3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
FNDC9Q8TBE3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.87□□□□□ -0.19
FNDC9Q8TBE3 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
FNDC9Q8TBE3 GK-202ENST00000378941 458 ntTSL 3 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms