Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF439Q8NDP4 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 AC015922.1-201ENST00000421102 1152 ntBASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 ZNF890P-202ENST00000530367 1156 ntBASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 LINC01115-203ENST00000606068 577 ntBASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 AL844908.2-201ENST00000609461 460 ntBASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 AC087499.5-201ENST00000452760 1342 ntBASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
ZNF439Q8NDP4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 AC148477.4-201ENST00000613430 1793 ntBASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 FAM86GP-201ENST00000448322 971 ntBASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 AC097493.3-201ENST00000509725 367 ntBASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 AC027369.6-201ENST00000525520 931 ntBASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 AC015910.1-201ENST00000579400 975 ntBASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.8□□□□□ -0.36
ZNF439Q8NDP4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms