Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC8.38□□□□□ -1.07
LCA10Q71F78 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
LCA10Q71F78 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC8.38□□□□□ -1.07
LCA10Q71F78 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC8.38□□□□□ -1.07
LCA10Q71F78 ACTG1P4-201ENST00000425123 1122 ntBASIC8.38□□□□□ -1.07
LCA10Q71F78 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC8.38□□□□□ -1.07
LCA10Q71F78 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 BX276092.5-203ENST00000456199 560 ntBASIC8.38□□□□□ -1.07
LCA10Q71F78 MINOS1P3-201ENST00000457048 203 ntBASIC8.38□□□□□ -1.07
LCA10Q71F78 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 AC091607.1-201ENST00000490318 1060 ntBASIC8.38□□□□□ -1.07
LCA10Q71F78 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC8.38□□□□□ -1.07
LCA10Q71F78 PPOX-219ENST00000544598 813 ntTSL 2 BASIC8.38□□□□□ -1.07
LCA10Q71F78 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC8.38□□□□□ -1.07
LCA10Q71F78 LINC01023-201ENST00000606054 436 ntBASIC8.38□□□□□ -1.07
LCA10Q71F78 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
LCA10Q71F78 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
LCA10Q71F78 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC8.38□□□□□ -1.07
LCA10Q71F78 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC8.38□□□□□ -1.07
LCA10Q71F78 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 AC148477.5-201ENST00000625164 1645 ntBASIC8.38□□□□□ -1.07
LCA10Q71F78 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC8.38□□□□□ -1.07
LCA10Q71F78 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC8.38□□□□□ -1.07
LCA10Q71F78 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 TSN-212ENST00000536142 3328 ntTSL 2 BASIC8.38□□□□□ -1.07
LCA10Q71F78 DKFZP434H168-201ENST00000567381 1905 ntBASIC8.38□□□□□ -1.07
LCA10Q71F78 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC8.38□□□□□ -1.07
LCA10Q71F78 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
LCA10Q71F78 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC8.38□□□□□ -1.07
LCA10Q71F78 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 KDM6A-214ENST00000621147 2876 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC8.38□□□□□ -1.07
LCA10Q71F78 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC8.38□□□□□ -1.07
LCA10Q71F78 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC8.38□□□□□ -1.07
LCA10Q71F78 SP100-205ENST00000409824 1802 ntTSL 5 BASIC8.38□□□□□ -1.07
LCA10Q71F78 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC8.38□□□□□ -1.07
LCA10Q71F78 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
LCA10Q71F78 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 MED25-212ENST00000618715 1467 ntTSL 5 BASIC8.38□□□□□ -1.07
LCA10Q71F78 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
LCA10Q71F78 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
LCA10Q71F78 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LCA10Q71F78 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC8.38□□□□□ -1.07
LCA10Q71F78 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
LCA10Q71F78 AGAP7P-201ENST00000582299 2062 ntBASIC8.38□□□□□ -1.07
LCA10Q71F78 AGAP14-201ENST00000624701 2060 ntBASIC8.38□□□□□ -1.07
LCA10Q71F78 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC8.37□□□□□ -1.07
LCA10Q71F78 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
LCA10Q71F78 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
LCA10Q71F78 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
LCA10Q71F78 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
LCA10Q71F78 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
LCA10Q71F78 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
LCA10Q71F78 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
LCA10Q71F78 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC8.37□□□□□ -1.07
LCA10Q71F78 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
LCA10Q71F78 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
LCA10Q71F78 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC8.37□□□□□ -1.07
LCA10Q71F78 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
LCA10Q71F78 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
LCA10Q71F78 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC8.37□□□□□ -1.07
LCA10Q71F78 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC8.37□□□□□ -1.07
LCA10Q71F78 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
LCA10Q71F78 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
LCA10Q71F78 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
LCA10Q71F78 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC8.37□□□□□ -1.07
LCA10Q71F78 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
LCA10Q71F78 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC8.37□□□□□ -1.07
LCA10Q71F78 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
LCA10Q71F78 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
LCA10Q71F78 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
LCA10Q71F78 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
LCA10Q71F78 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
LCA10Q71F78 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms