Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 AP3S2-216ENST00000617003 1561 ntBASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00242Q5T6M2 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 AC126335.2-201ENST00000623362 4637 ntBASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 FO393414.2-201ENST00000405153 598 ntBASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 HNRNPA1P28-201ENST00000424481 961 ntBASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 IGHV3-62-201ENST00000520057 340 ntBASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 KRT8P23-201ENST00000560090 1207 ntBASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 AC243562.1-201ENST00000560672 389 ntBASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 AC091812.2-201ENST00000619081 385 ntBASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 AC010327.5-201ENST00000586923 3061 ntBASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 FES-203ENST00000394302 2133 ntTSL 5 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
LINC00242Q5T6M2 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 ARHGAP23P1-201ENST00000562773 1937 ntBASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
LINC00242Q5T6M2 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms