Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.03■□□□□ -0
SGO1Q5FBB7 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SGO1Q5FBB7 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.03■□□□□ -0
SGO1Q5FBB7 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.03■□□□□ -0
SGO1Q5FBB7 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SGO1Q5FBB7 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.03■□□□□ -0
SGO1Q5FBB7 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.03■□□□□ -0
SGO1Q5FBB7 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SGO1Q5FBB7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.03■□□□□ -0
SGO1Q5FBB7 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SGO1Q5FBB7 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SGO1Q5FBB7 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.03■□□□□ -0
SGO1Q5FBB7 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.03■□□□□ -0
SGO1Q5FBB7 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SGO1Q5FBB7 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SGO1Q5FBB7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.02■□□□□ -0
SGO1Q5FBB7 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.02■□□□□ -0
SGO1Q5FBB7 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SGO1Q5FBB7 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SGO1Q5FBB7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.02■□□□□ -0
SGO1Q5FBB7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SGO1Q5FBB7 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.02■□□□□ -0
SGO1Q5FBB7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.02■□□□□ -0
SGO1Q5FBB7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SGO1Q5FBB7 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SGO1Q5FBB7 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SGO1Q5FBB7 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SGO1Q5FBB7 AC015656.1-201ENST00000624209 3578 ntBASIC15.02■□□□□ -0
SGO1Q5FBB7 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
SGO1Q5FBB7 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.02■□□□□ -0
SGO1Q5FBB7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SGO1Q5FBB7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SGO1Q5FBB7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SGO1Q5FBB7 RPL5P21-201ENST00000404620 815 ntBASIC15.02■□□□□ -0
SGO1Q5FBB7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.02■□□□□ -0
SGO1Q5FBB7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.02■□□□□ -0
SGO1Q5FBB7 HLA-V-204ENST00000476601 1289 ntBASIC15.02■□□□□ -0
SGO1Q5FBB7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.02■□□□□ -0
SGO1Q5FBB7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.02■□□□□ -0
SGO1Q5FBB7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.02■□□□□ -0
SGO1Q5FBB7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SGO1Q5FBB7 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SGO1Q5FBB7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.02■□□□□ -0
SGO1Q5FBB7 AC093028.1-201ENST00000622998 982 ntBASIC15.02■□□□□ -0
SGO1Q5FBB7 AL109936.8-201ENST00000641772 604 ntBASIC15.02■□□□□ -0
SGO1Q5FBB7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
SGO1Q5FBB7 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.02□□□□□ -0.01
SGO1Q5FBB7 CICP23-201ENST00000605013 2741 ntBASIC15.02□□□□□ -0.01
SGO1Q5FBB7 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SGO1Q5FBB7 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SGO1Q5FBB7 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SGO1Q5FBB7 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SGO1Q5FBB7 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SGO1Q5FBB7 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SGO1Q5FBB7 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.02□□□□□ -0.01
SGO1Q5FBB7 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SGO1Q5FBB7 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SGO1Q5FBB7 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 KLF2P3-201ENST00000451977 1087 ntBASIC15.01□□□□□ -0.01
SGO1Q5FBB7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 AC051619.7-201ENST00000568314 623 ntBASIC15.01□□□□□ -0.01
SGO1Q5FBB7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 AC073592.8-201ENST00000624126 511 ntBASIC15.01□□□□□ -0.01
SGO1Q5FBB7 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 Z97205.2-201ENST00000564697 1639 ntBASIC15.01□□□□□ -0.01
SGO1Q5FBB7 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SGO1Q5FBB7 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms