Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 AC009779.1-201ENST00000551138 283 ntBASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 SOD2-202ENST00000367054 815 ntTSL 2 BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 AC239868.1-201ENST00000369385 493 ntBASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 AC026410.1-201ENST00000507366 1101 ntBASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 AC006158.1-201ENST00000610661 249 ntBASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 AC087392.5-201ENST00000612517 489 ntBASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 AC073911.3-201ENST00000624401 631 ntBASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.74□□□□□ -0.05
RSPO4Q2I0M5 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 AC005052.1-201ENST00000625181 2492 ntBASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 BAK1P1-201ENST00000317045 636 ntBASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 AC026320.2-201ENST00000434379 478 ntBASIC14.73□□□□□ -0.05
RSPO4Q2I0M5 LYPLA2P1-203ENST00000447689 696 ntBASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms