Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN1BQ07699 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN1BQ07699 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.8□□□□□ -0.2
SCN1BQ07699 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.8□□□□□ -0.2
SCN1BQ07699 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SCN1BQ07699 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SCN1BQ07699 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN1BQ07699 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
SCN1BQ07699 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN1BQ07699 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.8□□□□□ -0.2
SCN1BQ07699 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN1BQ07699 COL6A4P2-202ENST00000504443 2753 ntBASIC13.8□□□□□ -0.2
SCN1BQ07699 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN1BQ07699 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SCN1BQ07699 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SCN1BQ07699 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SCN1BQ07699 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN1BQ07699 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.8□□□□□ -0.2
SCN1BQ07699 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN1BQ07699 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN1BQ07699 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.8□□□□□ -0.2
SCN1BQ07699 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.8□□□□□ -0.2
SCN1BQ07699 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.8□□□□□ -0.2
SCN1BQ07699 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.8□□□□□ -0.2
SCN1BQ07699 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.8□□□□□ -0.2
SCN1BQ07699 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SCN1BQ07699 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.8□□□□□ -0.2
SCN1BQ07699 RHOQP3-201ENST00000437982 621 ntBASIC13.8□□□□□ -0.2
SCN1BQ07699 AC245100.5-201ENST00000452108 331 ntBASIC13.8□□□□□ -0.2
SCN1BQ07699 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.8□□□□□ -0.2
SCN1BQ07699 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.8□□□□□ -0.2
SCN1BQ07699 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.8□□□□□ -0.2
SCN1BQ07699 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.8□□□□□ -0.2
SCN1BQ07699 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SCN1BQ07699 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.8□□□□□ -0.2
SCN1BQ07699 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SCN1BQ07699 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN1BQ07699 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN1BQ07699 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SCN1BQ07699 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SCN1BQ07699 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN1BQ07699 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.8□□□□□ -0.2
SCN1BQ07699 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SCN1BQ07699 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.8□□□□□ -0.2
SCN1BQ07699 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN1BQ07699 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN1BQ07699 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.8□□□□□ -0.2
SCN1BQ07699 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN1BQ07699 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN1BQ07699 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN1BQ07699 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN1BQ07699 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SCN1BQ07699 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.8□□□□□ -0.2
SCN1BQ07699 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SCN1BQ07699 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SCN1BQ07699 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SCN1BQ07699 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.79□□□□□ -0.2
SCN1BQ07699 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN1BQ07699 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN1BQ07699 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SCN1BQ07699 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SCN1BQ07699 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SCN1BQ07699 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SCN1BQ07699 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN1BQ07699 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.79□□□□□ -0.2
SCN1BQ07699 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN1BQ07699 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN1BQ07699 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SCN1BQ07699 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SCN1BQ07699 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SCN1BQ07699 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SCN1BQ07699 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.79□□□□□ -0.2
SCN1BQ07699 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.79□□□□□ -0.2
SCN1BQ07699 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN1BQ07699 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SCN1BQ07699 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.79□□□□□ -0.2
SCN1BQ07699 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.79□□□□□ -0.2
SCN1BQ07699 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN1BQ07699 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN1BQ07699 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN1BQ07699 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SCN1BQ07699 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.79□□□□□ -0.2
SCN1BQ07699 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN1BQ07699 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.79□□□□□ -0.2
SCN1BQ07699 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN1BQ07699 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SCN1BQ07699 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SCN1BQ07699 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN1BQ07699 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN1BQ07699 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN1BQ07699 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN1BQ07699 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SCN1BQ07699 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.79□□□□□ -0.2
SCN1BQ07699 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.79□□□□□ -0.2
SCN1BQ07699 AL590627.1-203ENST00000421194 1026 ntBASIC13.79□□□□□ -0.2
SCN1BQ07699 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SCN1BQ07699 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.79□□□□□ -0.2
SCN1BQ07699 MIR3909-201ENST00000579518 119 ntBASIC13.79□□□□□ -0.2
SCN1BQ07699 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.79□□□□□ -0.2
SCN1BQ07699 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms