Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
USP8P40818 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USP8P40818 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP8P40818 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.86■□□□□ 0.29
USP8P40818 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.86■□□□□ 0.29
USP8P40818 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP8P40818 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.86■□□□□ 0.29
USP8P40818 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP8P40818 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.86■□□□□ 0.29
USP8P40818 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
USP8P40818 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP8P40818 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USP8P40818 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP8P40818 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USP8P40818 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.86■□□□□ 0.29
USP8P40818 AC091951.1-201ENST00000512854 2465 ntBASIC16.86■□□□□ 0.29
USP8P40818 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.86■□□□□ 0.29
USP8P40818 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP8P40818 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP8P40818 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP8P40818 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP8P40818 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP8P40818 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.85■□□□□ 0.29
USP8P40818 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP8P40818 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP8P40818 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
USP8P40818 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
USP8P40818 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP8P40818 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
USP8P40818 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.85■□□□□ 0.29
USP8P40818 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
USP8P40818 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP8P40818 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.85■□□□□ 0.29
USP8P40818 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP8P40818 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP8P40818 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
USP8P40818 MIR943-201ENST00000401286 94 ntBASIC16.85■□□□□ 0.29
USP8P40818 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.85■□□□□ 0.29
USP8P40818 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.85■□□□□ 0.29
USP8P40818 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.85■□□□□ 0.29
USP8P40818 AL645939.2-201ENST00000427340 991 ntBASIC16.85■□□□□ 0.29
USP8P40818 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
USP8P40818 AL512361.1-201ENST00000554200 418 ntBASIC16.85■□□□□ 0.29
USP8P40818 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
USP8P40818 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.85■□□□□ 0.29
USP8P40818 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP8P40818 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.85■□□□□ 0.29
USP8P40818 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.85■□□□□ 0.29
USP8P40818 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP8P40818 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP8P40818 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
USP8P40818 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
USP8P40818 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
USP8P40818 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
USP8P40818 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
USP8P40818 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
USP8P40818 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.85■□□□□ 0.29
USP8P40818 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC16.85■□□□□ 0.29
USP8P40818 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.85■□□□□ 0.29
USP8P40818 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC16.85■□□□□ 0.29
USP8P40818 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
USP8P40818 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP8P40818 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
USP8P40818 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP8P40818 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP8P40818 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
USP8P40818 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP8P40818 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP8P40818 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.84■□□□□ 0.29
USP8P40818 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
USP8P40818 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP8P40818 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP8P40818 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
USP8P40818 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP8P40818 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
USP8P40818 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.84■□□□□ 0.29
USP8P40818 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.84■□□□□ 0.29
USP8P40818 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.84■□□□□ 0.29
USP8P40818 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.84■□□□□ 0.29
USP8P40818 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.84■□□□□ 0.29
USP8P40818 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.84■□□□□ 0.29
USP8P40818 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP8P40818 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.84■□□□□ 0.29
USP8P40818 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.84■□□□□ 0.29
USP8P40818 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.84■□□□□ 0.29
USP8P40818 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
USP8P40818 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP8P40818 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.84■□□□□ 0.29
USP8P40818 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.84■□□□□ 0.29
USP8P40818 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP8P40818 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP8P40818 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
USP8P40818 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USP8P40818 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.84■□□□□ 0.29
USP8P40818 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
USP8P40818 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.84■□□□□ 0.29
USP8P40818 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.84■□□□□ 0.29
USP8P40818 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.84■□□□□ 0.29
USP8P40818 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
USP8P40818 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms