Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CEACAM3P40198 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CEACAM3P40198 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.6□□□□□ -0.39
CEACAM3P40198 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CEACAM3P40198 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CEACAM3P40198 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CEACAM3P40198 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CEACAM3P40198 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.6□□□□□ -0.39
CEACAM3P40198 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CEACAM3P40198 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CEACAM3P40198 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
CEACAM3P40198 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CEACAM3P40198 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CEACAM3P40198 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CEACAM3P40198 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.6□□□□□ -0.39
CEACAM3P40198 TMPRSS11CP-201ENST00000453277 683 ntBASIC12.6□□□□□ -0.39
CEACAM3P40198 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.6□□□□□ -0.39
CEACAM3P40198 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CEACAM3P40198 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.6□□□□□ -0.39
CEACAM3P40198 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.6□□□□□ -0.39
CEACAM3P40198 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.6□□□□□ -0.39
CEACAM3P40198 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC12.6□□□□□ -0.39
CEACAM3P40198 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.6□□□□□ -0.39
CEACAM3P40198 AC140912.1-201ENST00000577171 1054 ntBASIC12.6□□□□□ -0.39
CEACAM3P40198 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.6□□□□□ -0.39
CEACAM3P40198 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.6□□□□□ -0.39
CEACAM3P40198 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC12.6□□□□□ -0.39
CEACAM3P40198 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CEACAM3P40198 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CEACAM3P40198 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CEACAM3P40198 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CEACAM3P40198 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
CEACAM3P40198 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CEACAM3P40198 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CEACAM3P40198 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CEACAM3P40198 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC12.6□□□□□ -0.39
CEACAM3P40198 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CEACAM3P40198 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CEACAM3P40198 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CEACAM3P40198 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CEACAM3P40198 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CEACAM3P40198 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CEACAM3P40198 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CEACAM3P40198 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.6□□□□□ -0.39
CEACAM3P40198 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CEACAM3P40198 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CEACAM3P40198 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CEACAM3P40198 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CEACAM3P40198 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CEACAM3P40198 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC12.59□□□□□ -0.39
CEACAM3P40198 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CEACAM3P40198 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.59□□□□□ -0.39
CEACAM3P40198 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CEACAM3P40198 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CEACAM3P40198 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CEACAM3P40198 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CEACAM3P40198 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CEACAM3P40198 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CEACAM3P40198 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.59□□□□□ -0.39
CEACAM3P40198 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CEACAM3P40198 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CEACAM3P40198 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.59□□□□□ -0.39
CEACAM3P40198 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CEACAM3P40198 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CEACAM3P40198 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
CEACAM3P40198 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.59□□□□□ -0.39
CEACAM3P40198 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.59□□□□□ -0.39
CEACAM3P40198 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CEACAM3P40198 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CEACAM3P40198 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.59□□□□□ -0.39
CEACAM3P40198 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.59□□□□□ -0.39
CEACAM3P40198 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.59□□□□□ -0.39
CEACAM3P40198 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.59□□□□□ -0.39
CEACAM3P40198 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.59□□□□□ -0.39
CEACAM3P40198 AC123567.1-201ENST00000548294 1261 ntBASIC12.59□□□□□ -0.39
CEACAM3P40198 MIR3197-201ENST00000582241 73 ntBASIC12.59□□□□□ -0.39
CEACAM3P40198 AC025181.2-201ENST00000606994 802 ntBASIC12.59□□□□□ -0.39
CEACAM3P40198 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.59□□□□□ -0.39
CEACAM3P40198 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CEACAM3P40198 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CEACAM3P40198 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CEACAM3P40198 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CEACAM3P40198 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.59□□□□□ -0.39
CEACAM3P40198 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CEACAM3P40198 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CEACAM3P40198 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.59□□□□□ -0.39
CEACAM3P40198 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CEACAM3P40198 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.59□□□□□ -0.39
CEACAM3P40198 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CEACAM3P40198 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CEACAM3P40198 SSR4P1-203ENST00000599569 2260 ntBASIC12.59□□□□□ -0.39
CEACAM3P40198 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CEACAM3P40198 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CEACAM3P40198 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CEACAM3P40198 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CEACAM3P40198 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC12.59□□□□□ -0.39
CEACAM3P40198 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CEACAM3P40198 CLK3P2-201ENST00000427566 1453 ntBASIC12.59□□□□□ -0.39
CEACAM3P40198 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CEACAM3P40198 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 825.6 ms