Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.72■□□□□ 0.11
SLC6A4P31645 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SLC6A4P31645 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.72■□□□□ 0.11
SLC6A4P31645 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SLC6A4P31645 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC6A4P31645 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A4P31645 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A4P31645 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A4P31645 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC6A4P31645 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A4P31645 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A4P31645 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SLC6A4P31645 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A4P31645 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A4P31645 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A4P31645 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SLC6A4P31645 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC6A4P31645 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A4P31645 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC6A4P31645 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC6A4P31645 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A4P31645 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A4P31645 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SLC6A4P31645 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC6A4P31645 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
SLC6A4P31645 AC138035.3-201ENST00000622706 2791 ntBASIC15.71■□□□□ 0.11
SLC6A4P31645 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC6A4P31645 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC6A4P31645 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC6A4P31645 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC6A4P31645 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SLC6A4P31645 CICP6-201ENST00000457191 2729 ntBASIC15.71■□□□□ 0.11
SLC6A4P31645 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC6A4P31645 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC6A4P31645 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC6A4P31645 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC6A4P31645 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC6A4P31645 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC6A4P31645 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.71■□□□□ 0.11
SLC6A4P31645 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC6A4P31645 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC6A4P31645 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.71■□□□□ 0.11
SLC6A4P31645 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC6A4P31645 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC6A4P31645 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.71■□□□□ 0.11
SLC6A4P31645 AC026954.1-201ENST00000429771 1293 ntBASIC15.71■□□□□ 0.11
SLC6A4P31645 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.71■□□□□ 0.11
SLC6A4P31645 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.71■□□□□ 0.11
SLC6A4P31645 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC6A4P31645 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.71■□□□□ 0.11
SLC6A4P31645 MIR6752-201ENST00000618442 71 ntBASIC15.71■□□□□ 0.11
SLC6A4P31645 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.71■□□□□ 0.11
SLC6A4P31645 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.71■□□□□ 0.11
SLC6A4P31645 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC6A4P31645 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.71■□□□□ 0.11
SLC6A4P31645 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC6A4P31645 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC6A4P31645 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SLC6A4P31645 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SLC6A4P31645 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.71■□□□□ 0.11
SLC6A4P31645 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC6A4P31645 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.71■□□□□ 0.11
SLC6A4P31645 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
SLC6A4P31645 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
SLC6A4P31645 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
SLC6A4P31645 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SLC6A4P31645 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A4P31645 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A4P31645 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A4P31645 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A4P31645 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A4P31645 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC6A4P31645 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A4P31645 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SLC6A4P31645 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
SLC6A4P31645 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A4P31645 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A4P31645 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A4P31645 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC6A4P31645 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A4P31645 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC6A4P31645 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC6A4P31645 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC6A4P31645 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A4P31645 HLA-V-201ENST00000429037 534 ntBASIC15.7■□□□□ 0.1
SLC6A4P31645 RPS2P32-201ENST00000439199 892 ntBASIC15.7■□□□□ 0.1
SLC6A4P31645 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC6A4P31645 CSF2RBP1-201ENST00000447905 391 ntBASIC15.7■□□□□ 0.1
SLC6A4P31645 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SLC6A4P31645 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.7■□□□□ 0.1
SLC6A4P31645 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.7■□□□□ 0.1
SLC6A4P31645 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.7■□□□□ 0.1
SLC6A4P31645 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SLC6A4P31645 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
SLC6A4P31645 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.7■□□□□ 0.1
SLC6A4P31645 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.7■□□□□ 0.1
SLC6A4P31645 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.7■□□□□ 0.1
SLC6A4P31645 AC132938.4-201ENST00000623835 848 ntBASIC15.7■□□□□ 0.1
SLC6A4P31645 RHOXF1P1-202ENST00000635473 501 ntBASIC15.7■□□□□ 0.1
SLC6A4P31645 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms