Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD40LGP29965 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD40LGP29965 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD40LGP29965 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
CD40LGP29965 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CD40LGP29965 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CD40LGP29965 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD40LGP29965 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD40LGP29965 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
CD40LGP29965 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD40LGP29965 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.7□□□□□ -0.22
CD40LGP29965 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.7□□□□□ -0.22
CD40LGP29965 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD40LGP29965 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.7□□□□□ -0.22
CD40LGP29965 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CD40LGP29965 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD40LGP29965 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD40LGP29965 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CD40LGP29965 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD40LGP29965 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD40LGP29965 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD40LGP29965 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CD40LGP29965 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CD40LGP29965 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.7□□□□□ -0.22
CD40LGP29965 AC004870.1-201ENST00000315132 882 ntBASIC13.7□□□□□ -0.22
CD40LGP29965 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD40LGP29965 TPT1P11-201ENST00000458482 498 ntBASIC13.7□□□□□ -0.22
CD40LGP29965 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.7□□□□□ -0.22
CD40LGP29965 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.7□□□□□ -0.22
CD40LGP29965 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.7□□□□□ -0.22
CD40LGP29965 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.7□□□□□ -0.22
CD40LGP29965 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.7□□□□□ -0.22
CD40LGP29965 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.7□□□□□ -0.22
CD40LGP29965 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD40LGP29965 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD40LGP29965 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
CD40LGP29965 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD40LGP29965 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
CD40LGP29965 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD40LGP29965 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD40LGP29965 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD40LGP29965 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD40LGP29965 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CD40LGP29965 KRT8P24-201ENST00000560290 1559 ntBASIC13.7□□□□□ -0.22
CD40LGP29965 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CD40LGP29965 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD40LGP29965 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD40LGP29965 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD40LGP29965 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD40LGP29965 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.7□□□□□ -0.22
CD40LGP29965 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.7□□□□□ -0.22
CD40LGP29965 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CD40LGP29965 AL118506.1-201ENST00000601296 3082 ntBASIC13.7□□□□□ -0.22
CD40LGP29965 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD40LGP29965 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD40LGP29965 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD40LGP29965 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40LGP29965 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40LGP29965 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CD40LGP29965 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40LGP29965 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40LGP29965 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CD40LGP29965 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD40LGP29965 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CD40LGP29965 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.69□□□□□ -0.22
CD40LGP29965 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40LGP29965 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40LGP29965 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD40LGP29965 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40LGP29965 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD40LGP29965 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.69□□□□□ -0.22
CD40LGP29965 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD40LGP29965 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40LGP29965 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CD40LGP29965 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40LGP29965 RPL5P21-201ENST00000404620 815 ntBASIC13.69□□□□□ -0.22
CD40LGP29965 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.69□□□□□ -0.22
CD40LGP29965 AL450487.1-201ENST00000426799 995 ntBASIC13.69□□□□□ -0.22
CD40LGP29965 AC093724.1-201ENST00000448659 1027 ntBASIC13.69□□□□□ -0.22
CD40LGP29965 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.69□□□□□ -0.22
CD40LGP29965 SAPCD2P3-201ENST00000455031 850 ntBASIC13.69□□□□□ -0.22
CD40LGP29965 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.69□□□□□ -0.22
CD40LGP29965 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC13.69□□□□□ -0.22
CD40LGP29965 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.69□□□□□ -0.22
CD40LGP29965 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.69□□□□□ -0.22
CD40LGP29965 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD40LGP29965 MIR4321-201ENST00000592276 80 ntBASIC13.69□□□□□ -0.22
CD40LGP29965 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.69□□□□□ -0.22
CD40LGP29965 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.69□□□□□ -0.22
CD40LGP29965 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CD40LGP29965 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.69□□□□□ -0.22
CD40LGP29965 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CD40LGP29965 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CD40LGP29965 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CD40LGP29965 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.69□□□□□ -0.22
CD40LGP29965 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40LGP29965 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40LGP29965 AP005117.1-201ENST00000584346 1413 ntBASIC13.69□□□□□ -0.22
CD40LGP29965 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD40LGP29965 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms