Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.14■□□□□ 0.17
MMP8P22894 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MMP8P22894 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MMP8P22894 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
MMP8P22894 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MMP8P22894 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.14■□□□□ 0.17
MMP8P22894 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MMP8P22894 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MMP8P22894 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.14■□□□□ 0.17
MMP8P22894 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MMP8P22894 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
MMP8P22894 REXO1L5P-201ENST00000622260 2098 ntBASIC16.14■□□□□ 0.17
MMP8P22894 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.14■□□□□ 0.17
MMP8P22894 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
MMP8P22894 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
MMP8P22894 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP8P22894 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
MMP8P22894 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.13■□□□□ 0.17
MMP8P22894 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.13■□□□□ 0.17
MMP8P22894 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
MMP8P22894 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.13■□□□□ 0.17
MMP8P22894 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP8P22894 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP8P22894 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.13■□□□□ 0.17
MMP8P22894 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP8P22894 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP8P22894 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.13■□□□□ 0.17
MMP8P22894 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
MMP8P22894 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.13■□□□□ 0.17
MMP8P22894 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP8P22894 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.13■□□□□ 0.17
MMP8P22894 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
MMP8P22894 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MMP8P22894 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP8P22894 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.13■□□□□ 0.17
MMP8P22894 AL390755.1-201ENST00000623716 2027 ntBASIC16.13■□□□□ 0.17
MMP8P22894 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
MMP8P22894 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MMP8P22894 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP8P22894 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.13■□□□□ 0.17
MMP8P22894 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MMP8P22894 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.13■□□□□ 0.17
MMP8P22894 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP8P22894 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MMP8P22894 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.13■□□□□ 0.17
MMP8P22894 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.13■□□□□ 0.17
MMP8P22894 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.13■□□□□ 0.17
MMP8P22894 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
MMP8P22894 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.13■□□□□ 0.17
MMP8P22894 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.13■□□□□ 0.17
MMP8P22894 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.13■□□□□ 0.17
MMP8P22894 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
MMP8P22894 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.13■□□□□ 0.17
MMP8P22894 AC007431.3-201ENST00000623221 587 ntBASIC16.13■□□□□ 0.17
MMP8P22894 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
MMP8P22894 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP8P22894 CICP14-201ENST00000629111 2732 ntBASIC16.13■□□□□ 0.17
MMP8P22894 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP8P22894 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP8P22894 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP8P22894 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
MMP8P22894 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.13■□□□□ 0.17
MMP8P22894 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.13■□□□□ 0.17
MMP8P22894 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
MMP8P22894 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.12■□□□□ 0.17
MMP8P22894 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MMP8P22894 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.12■□□□□ 0.17
MMP8P22894 KRT8P22-201ENST00000562317 1415 ntBASIC16.12■□□□□ 0.17
MMP8P22894 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.12■□□□□ 0.17
MMP8P22894 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
MMP8P22894 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
MMP8P22894 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.12■□□□□ 0.17
MMP8P22894 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP8P22894 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MMP8P22894 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP8P22894 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
MMP8P22894 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
MMP8P22894 C1QBPP1-201ENST00000400117 770 ntBASIC16.12■□□□□ 0.17
MMP8P22894 AC236430.1-201ENST00000402231 743 ntBASIC16.12■□□□□ 0.17
MMP8P22894 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.12■□□□□ 0.17
MMP8P22894 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.12■□□□□ 0.17
MMP8P22894 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MMP8P22894 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.12■□□□□ 0.17
MMP8P22894 AL359711.2-201ENST00000563105 872 ntBASIC16.12■□□□□ 0.17
MMP8P22894 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
MMP8P22894 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP8P22894 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP8P22894 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP8P22894 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP8P22894 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
MMP8P22894 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP8P22894 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP8P22894 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP8P22894 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
MMP8P22894 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP8P22894 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
MMP8P22894 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP8P22894 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.12■□□□□ 0.17
MMP8P22894 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MMP8P22894 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms