Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 AP002469.2-201ENST00000531724 424 ntBASIC9.54□□□□□ -0.88
PDE6GP18545 FGF14-AS2-201ENST00000606448 1074 ntBASIC9.54□□□□□ -0.88
PDE6GP18545 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC9.54□□□□□ -0.88
PDE6GP18545 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
PDE6GP18545 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
PDE6GP18545 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
PDE6GP18545 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PDE6GP18545 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC9.54□□□□□ -0.88
PDE6GP18545 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
PDE6GP18545 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
PDE6GP18545 TCAM1P-207ENST00000485295 1537 ntBASIC9.54□□□□□ -0.88
PDE6GP18545 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC9.54□□□□□ -0.88
PDE6GP18545 LSS-211ENST00000522411 2523 ntTSL 2 BASIC9.54□□□□□ -0.88
PDE6GP18545 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PDE6GP18545 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC9.54□□□□□ -0.88
PDE6GP18545 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC9.54□□□□□ -0.88
PDE6GP18545 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PDE6GP18545 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC9.54□□□□□ -0.88
PDE6GP18545 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
PDE6GP18545 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC9.54□□□□□ -0.88
PDE6GP18545 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
PDE6GP18545 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC9.54□□□□□ -0.88
PDE6GP18545 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC9.54□□□□□ -0.88
PDE6GP18545 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PDE6GP18545 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PDE6GP18545 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PDE6GP18545 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
PDE6GP18545 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC9.53□□□□□ -0.88
PDE6GP18545 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC9.53□□□□□ -0.88
PDE6GP18545 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC9.53□□□□□ -0.88
PDE6GP18545 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC9.53□□□□□ -0.88
PDE6GP18545 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
PDE6GP18545 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
PDE6GP18545 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC9.53□□□□□ -0.88
PDE6GP18545 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC9.53□□□□□ -0.88
PDE6GP18545 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 ZBTB45P2-201ENST00000452245 1531 ntBASIC9.53□□□□□ -0.88
PDE6GP18545 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 INTS4P1-201ENST00000438455 1935 ntBASIC9.53□□□□□ -0.88
PDE6GP18545 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
PDE6GP18545 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC9.53□□□□□ -0.88
PDE6GP18545 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC9.53□□□□□ -0.88
PDE6GP18545 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
PDE6GP18545 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 COPE-203ENST00000351079 907 ntTSL 2 BASIC9.53□□□□□ -0.88
PDE6GP18545 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC9.53□□□□□ -0.88
PDE6GP18545 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC9.53□□□□□ -0.88
PDE6GP18545 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 SPDYE15P-201ENST00000424157 909 ntBASIC9.53□□□□□ -0.88
PDE6GP18545 AC092597.1-201ENST00000487352 616 ntBASIC9.53□□□□□ -0.88
PDE6GP18545 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC9.53□□□□□ -0.88
PDE6GP18545 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
PDE6GP18545 MIR3909-201ENST00000579518 119 ntBASIC9.53□□□□□ -0.88
PDE6GP18545 CYB561-217ENST00000582997 877 ntTSL 5 BASIC9.53□□□□□ -0.88
PDE6GP18545 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 SPTSSB-204ENST00000617024 1292 ntBASIC9.53□□□□□ -0.88
PDE6GP18545 AL023973.1-201ENST00000624619 620 ntBASIC9.53□□□□□ -0.88
PDE6GP18545 AC097493.4-201ENST00000641197 219 ntBASIC9.53□□□□□ -0.88
PDE6GP18545 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 AC105206.1-202ENST00000314927 2368 ntBASIC9.53□□□□□ -0.88
PDE6GP18545 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
PDE6GP18545 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
PDE6GP18545 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC9.53□□□□□ -0.88
PDE6GP18545 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC9.53□□□□□ -0.88
PDE6GP18545 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC9.53□□□□□ -0.88
PDE6GP18545 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
PDE6GP18545 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC9.53□□□□□ -0.88
PDE6GP18545 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
PDE6GP18545 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
PDE6GP18545 AC130686.1-201ENST00000622936 2466 ntBASIC9.53□□□□□ -0.88
PDE6GP18545 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
PDE6GP18545 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC9.52□□□□□ -0.88
PDE6GP18545 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC9.52□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms