Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
BMP4P12644 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
BMP4P12644 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC14.22□□□□□ -0.13
BMP4P12644 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.22□□□□□ -0.13
BMP4P12644 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
BMP4P12644 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BMP4P12644 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.22□□□□□ -0.13
BMP4P12644 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
BMP4P12644 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.22□□□□□ -0.13
BMP4P12644 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BMP4P12644 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BMP4P12644 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.22□□□□□ -0.13
BMP4P12644 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.22□□□□□ -0.13
BMP4P12644 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
BMP4P12644 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BMP4P12644 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
BMP4P12644 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.22□□□□□ -0.13
BMP4P12644 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
BMP4P12644 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.22□□□□□ -0.13
BMP4P12644 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
BMP4P12644 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
BMP4P12644 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BMP4P12644 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BMP4P12644 SBF1P1-201ENST00000444527 5631 ntBASIC14.22□□□□□ -0.13
BMP4P12644 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BMP4P12644 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BMP4P12644 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
BMP4P12644 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BMP4P12644 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
BMP4P12644 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
BMP4P12644 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BMP4P12644 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BMP4P12644 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.21□□□□□ -0.13
BMP4P12644 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
BMP4P12644 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BMP4P12644 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
BMP4P12644 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BMP4P12644 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BMP4P12644 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
BMP4P12644 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
BMP4P12644 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BMP4P12644 TUBB3P1-201ENST00000405796 1332 ntBASIC14.21□□□□□ -0.13
BMP4P12644 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
BMP4P12644 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
BMP4P12644 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
BMP4P12644 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
BMP4P12644 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
BMP4P12644 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
BMP4P12644 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BMP4P12644 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BMP4P12644 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BMP4P12644 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.21□□□□□ -0.13
BMP4P12644 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
BMP4P12644 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BMP4P12644 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.21□□□□□ -0.13
BMP4P12644 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.21□□□□□ -0.13
BMP4P12644 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.21□□□□□ -0.13
BMP4P12644 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BMP4P12644 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
BMP4P12644 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BMP4P12644 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
BMP4P12644 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.21□□□□□ -0.13
BMP4P12644 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.21□□□□□ -0.13
BMP4P12644 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.21□□□□□ -0.13
BMP4P12644 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.21□□□□□ -0.13
BMP4P12644 BASP1P1-201ENST00000430708 665 ntBASIC14.21□□□□□ -0.13
BMP4P12644 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.21□□□□□ -0.13
BMP4P12644 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.21□□□□□ -0.13
BMP4P12644 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.21□□□□□ -0.13
BMP4P12644 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.21□□□□□ -0.13
BMP4P12644 AC093520.2-201ENST00000561830 333 ntBASIC14.21□□□□□ -0.13
BMP4P12644 AC027307.2-201ENST00000591252 911 ntBASIC14.21□□□□□ -0.13
BMP4P12644 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.21□□□□□ -0.13
BMP4P12644 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
BMP4P12644 Z92544.3-201ENST00000624747 417 ntBASIC14.21□□□□□ -0.13
BMP4P12644 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.21□□□□□ -0.13
BMP4P12644 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BMP4P12644 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BMP4P12644 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
BMP4P12644 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
BMP4P12644 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.21□□□□□ -0.13
BMP4P12644 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
BMP4P12644 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.21□□□□□ -0.14
BMP4P12644 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.21□□□□□ -0.14
BMP4P12644 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.21□□□□□ -0.14
BMP4P12644 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
BMP4P12644 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
BMP4P12644 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
BMP4P12644 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.21□□□□□ -0.14
BMP4P12644 AC005622.1-201ENST00000636801 1703 ntBASIC14.21□□□□□ -0.14
BMP4P12644 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
BMP4P12644 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
BMP4P12644 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.21□□□□□ -0.14
BMP4P12644 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.21□□□□□ -0.14
BMP4P12644 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
BMP4P12644 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.2□□□□□ -0.14
BMP4P12644 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
BMP4P12644 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
BMP4P12644 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BMP4P12644 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms