Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
GAPDHP04406 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
GAPDHP04406 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GAPDHP04406 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
GAPDHP04406 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
GAPDHP04406 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GAPDHP04406 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.95□□□□□ -0.34
GAPDHP04406 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
GAPDHP04406 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.94□□□□□ -0.34
GAPDHP04406 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAPDHP04406 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAPDHP04406 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAPDHP04406 CETN4P-206ENST00000642099 2168 ntBASIC12.94□□□□□ -0.34
GAPDHP04406 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAPDHP04406 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
GAPDHP04406 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAPDHP04406 AC015656.1-201ENST00000624209 3578 ntBASIC12.94□□□□□ -0.34
GAPDHP04406 TUBB3P1-201ENST00000405796 1332 ntBASIC12.94□□□□□ -0.34
GAPDHP04406 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.94□□□□□ -0.34
GAPDHP04406 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GAPDHP04406 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.94□□□□□ -0.34
GAPDHP04406 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.94□□□□□ -0.34
GAPDHP04406 BX640514.1-201ENST00000583223 1918 ntBASIC12.94□□□□□ -0.34
GAPDHP04406 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
GAPDHP04406 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GAPDHP04406 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
GAPDHP04406 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAPDHP04406 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAPDHP04406 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GAPDHP04406 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAPDHP04406 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
GAPDHP04406 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
GAPDHP04406 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAPDHP04406 AL139400.1-201ENST00000366220 510 ntBASIC12.94□□□□□ -0.34
GAPDHP04406 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.94□□□□□ -0.34
GAPDHP04406 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAPDHP04406 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
GAPDHP04406 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.94□□□□□ -0.34
GAPDHP04406 FO393414.2-201ENST00000405153 598 ntBASIC12.94□□□□□ -0.34
GAPDHP04406 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC12.94□□□□□ -0.34
GAPDHP04406 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.94□□□□□ -0.34
GAPDHP04406 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.94□□□□□ -0.34
GAPDHP04406 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.94□□□□□ -0.34
GAPDHP04406 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.94□□□□□ -0.34
GAPDHP04406 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC12.94□□□□□ -0.34
GAPDHP04406 COQ9-214ENST00000567933 882 ntTSL 3 BASIC12.94□□□□□ -0.34
GAPDHP04406 LSM12-202ENST00000585388 942 ntTSL 3 BASIC12.94□□□□□ -0.34
GAPDHP04406 AL589739.1-201ENST00000607720 493 ntBASIC12.94□□□□□ -0.34
GAPDHP04406 AC006538.3-201ENST00000612495 578 ntBASIC12.94□□□□□ -0.34
GAPDHP04406 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.94□□□□□ -0.34
GAPDHP04406 Z92544.3-201ENST00000624747 417 ntBASIC12.94□□□□□ -0.34
GAPDHP04406 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC12.94□□□□□ -0.34
GAPDHP04406 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GAPDHP04406 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
GAPDHP04406 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GAPDHP04406 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.94□□□□□ -0.34
GAPDHP04406 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
GAPDHP04406 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GAPDHP04406 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAPDHP04406 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.94□□□□□ -0.34
GAPDHP04406 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.94□□□□□ -0.34
GAPDHP04406 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAPDHP04406 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.94□□□□□ -0.34
GAPDHP04406 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
GAPDHP04406 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
GAPDHP04406 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.94□□□□□ -0.34
GAPDHP04406 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GAPDHP04406 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GAPDHP04406 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GAPDHP04406 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.93□□□□□ -0.34
GAPDHP04406 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
GAPDHP04406 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
GAPDHP04406 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GAPDHP04406 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.93□□□□□ -0.34
GAPDHP04406 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.93□□□□□ -0.34
GAPDHP04406 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
GAPDHP04406 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GAPDHP04406 KRT18P28-201ENST00000453838 1332 ntBASIC12.93□□□□□ -0.34
GAPDHP04406 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
GAPDHP04406 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
GAPDHP04406 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
GAPDHP04406 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GAPDHP04406 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
GAPDHP04406 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
GAPDHP04406 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GAPDHP04406 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GAPDHP04406 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.93□□□□□ -0.34
GAPDHP04406 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GAPDHP04406 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.93□□□□□ -0.34
GAPDHP04406 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.93□□□□□ -0.34
GAPDHP04406 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
GAPDHP04406 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
GAPDHP04406 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
GAPDHP04406 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
GAPDHP04406 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GAPDHP04406 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.93□□□□□ -0.34
GAPDHP04406 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
GAPDHP04406 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GAPDHP04406 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GAPDHP04406 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms