Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.94□□□□□ -0.34
SIX6O95475 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.94□□□□□ -0.34
SIX6O95475 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SIX6O95475 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SIX6O95475 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SIX6O95475 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.94□□□□□ -0.34
SIX6O95475 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SIX6O95475 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SIX6O95475 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SIX6O95475 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.94□□□□□ -0.34
SIX6O95475 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SIX6O95475 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIX6O95475 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIX6O95475 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.93□□□□□ -0.34
SIX6O95475 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SIX6O95475 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIX6O95475 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIX6O95475 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.93□□□□□ -0.34
SIX6O95475 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SIX6O95475 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SIX6O95475 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
SIX6O95475 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIX6O95475 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SIX6O95475 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.93□□□□□ -0.34
SIX6O95475 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SIX6O95475 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.93□□□□□ -0.34
SIX6O95475 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.93□□□□□ -0.34
SIX6O95475 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
SIX6O95475 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.93□□□□□ -0.34
SIX6O95475 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.93□□□□□ -0.34
SIX6O95475 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SIX6O95475 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIX6O95475 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.93□□□□□ -0.34
SIX6O95475 FXN-203ENST00000396366 922 ntTSL 2 BASIC12.93□□□□□ -0.34
SIX6O95475 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC12.93□□□□□ -0.34
SIX6O95475 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.93□□□□□ -0.34
SIX6O95475 PMS2P4-201ENST00000412466 1052 ntBASIC12.93□□□□□ -0.34
SIX6O95475 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SIX6O95475 DAP-202ENST00000432074 1048 ntTSL 2 BASIC12.93□□□□□ -0.34
SIX6O95475 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC12.93□□□□□ -0.34
SIX6O95475 AC099336.1-202ENST00000602961 463 ntBASIC12.93□□□□□ -0.34
SIX6O95475 CCNC-219ENST00000627680 896 ntTSL 5 BASIC12.93□□□□□ -0.34
SIX6O95475 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.93□□□□□ -0.34
SIX6O95475 AL691432.1-201ENST00000596308 1422 ntBASIC12.93□□□□□ -0.34
SIX6O95475 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.93□□□□□ -0.34
SIX6O95475 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.93□□□□□ -0.34
SIX6O95475 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.93□□□□□ -0.34
SIX6O95475 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SIX6O95475 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.93□□□□□ -0.34
SIX6O95475 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIX6O95475 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIX6O95475 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIX6O95475 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIX6O95475 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
SIX6O95475 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIX6O95475 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIX6O95475 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SIX6O95475 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.93□□□□□ -0.34
SIX6O95475 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
SIX6O95475 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIX6O95475 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.93□□□□□ -0.34
SIX6O95475 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SIX6O95475 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SIX6O95475 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
SIX6O95475 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SIX6O95475 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.92□□□□□ -0.34
SIX6O95475 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.92□□□□□ -0.34
SIX6O95475 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SIX6O95475 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
SIX6O95475 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SIX6O95475 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.92□□□□□ -0.34
SIX6O95475 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.92□□□□□ -0.34
SIX6O95475 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.92□□□□□ -0.34
SIX6O95475 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.92□□□□□ -0.34
SIX6O95475 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
SIX6O95475 AL031595.1-201ENST00000623969 4709 ntBASIC12.92□□□□□ -0.34
SIX6O95475 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SIX6O95475 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
SIX6O95475 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.92□□□□□ -0.34
SIX6O95475 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SIX6O95475 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SIX6O95475 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SIX6O95475 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SIX6O95475 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SIX6O95475 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SIX6O95475 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SIX6O95475 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SIX6O95475 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SIX6O95475 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SIX6O95475 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SIX6O95475 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SIX6O95475 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC12.92□□□□□ -0.34
SIX6O95475 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
SIX6O95475 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC12.92□□□□□ -0.34
SIX6O95475 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.92□□□□□ -0.34
SIX6O95475 AP002383.4-201ENST00000442518 975 ntBASIC12.92□□□□□ -0.34
SIX6O95475 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.92□□□□□ -0.34
SIX6O95475 AC063952.2-201ENST00000498792 1227 ntBASIC12.92□□□□□ -0.34
SIX6O95475 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC12.92□□□□□ -0.34
SIX6O95475 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms