Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.74□□□□□ -0.05
PRICKLE3O43900 U91328.1-201ENST00000437528 223 ntBASIC14.74□□□□□ -0.05
PRICKLE3O43900 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.74□□□□□ -0.05
PRICKLE3O43900 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.74□□□□□ -0.05
PRICKLE3O43900 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PRICKLE3O43900 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.74□□□□□ -0.05
PRICKLE3O43900 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
PRICKLE3O43900 AC106886.1-201ENST00000568660 600 ntBASIC14.74□□□□□ -0.05
PRICKLE3O43900 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.74□□□□□ -0.05
PRICKLE3O43900 BTNL10-201ENST00000595971 695 ntBASIC14.74□□□□□ -0.05
PRICKLE3O43900 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.74□□□□□ -0.05
PRICKLE3O43900 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PRICKLE3O43900 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PRICKLE3O43900 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
PRICKLE3O43900 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.74□□□□□ -0.05
PRICKLE3O43900 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PRICKLE3O43900 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PRICKLE3O43900 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PRICKLE3O43900 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
PRICKLE3O43900 AC126755.1-201ENST00000525846 6405 ntBASIC14.74□□□□□ -0.05
PRICKLE3O43900 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
PRICKLE3O43900 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PRICKLE3O43900 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.74□□□□□ -0.05
PRICKLE3O43900 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PRICKLE3O43900 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.74□□□□□ -0.05
PRICKLE3O43900 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PRICKLE3O43900 KRT8P14-201ENST00000414254 1442 ntBASIC14.74□□□□□ -0.05
PRICKLE3O43900 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PRICKLE3O43900 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PRICKLE3O43900 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
PRICKLE3O43900 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PRICKLE3O43900 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PRICKLE3O43900 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PRICKLE3O43900 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PRICKLE3O43900 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
PRICKLE3O43900 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PRICKLE3O43900 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PRICKLE3O43900 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
PRICKLE3O43900 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PRICKLE3O43900 WASH3P-207ENST00000560956 1394 ntBASIC14.73□□□□□ -0.05
PRICKLE3O43900 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PRICKLE3O43900 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
PRICKLE3O43900 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PRICKLE3O43900 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PRICKLE3O43900 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.73□□□□□ -0.05
PRICKLE3O43900 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PRICKLE3O43900 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PRICKLE3O43900 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PRICKLE3O43900 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PRICKLE3O43900 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PRICKLE3O43900 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PRICKLE3O43900 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.73□□□□□ -0.05
PRICKLE3O43900 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PRICKLE3O43900 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
PRICKLE3O43900 AC005229.1-201ENST00000392885 409 ntBASIC14.73□□□□□ -0.05
PRICKLE3O43900 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.73□□□□□ -0.05
PRICKLE3O43900 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
PRICKLE3O43900 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.73□□□□□ -0.05
PRICKLE3O43900 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.73□□□□□ -0.05
PRICKLE3O43900 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
PRICKLE3O43900 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
PRICKLE3O43900 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.73□□□□□ -0.05
PRICKLE3O43900 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.73□□□□□ -0.05
PRICKLE3O43900 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PRICKLE3O43900 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PRICKLE3O43900 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.73□□□□□ -0.05
PRICKLE3O43900 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.73□□□□□ -0.05
PRICKLE3O43900 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.73□□□□□ -0.05
PRICKLE3O43900 AC233724.13-201ENST00000598383 410 ntBASIC14.73□□□□□ -0.05
PRICKLE3O43900 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.73□□□□□ -0.05
PRICKLE3O43900 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PRICKLE3O43900 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.73□□□□□ -0.05
PRICKLE3O43900 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PRICKLE3O43900 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
PRICKLE3O43900 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PRICKLE3O43900 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PRICKLE3O43900 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PRICKLE3O43900 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
PRICKLE3O43900 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PRICKLE3O43900 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PRICKLE3O43900 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PRICKLE3O43900 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PRICKLE3O43900 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.73□□□□□ -0.05
PRICKLE3O43900 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PRICKLE3O43900 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PRICKLE3O43900 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
PRICKLE3O43900 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PRICKLE3O43900 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PRICKLE3O43900 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.73□□□□□ -0.05
PRICKLE3O43900 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PRICKLE3O43900 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.73□□□□□ -0.05
PRICKLE3O43900 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PRICKLE3O43900 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
PRICKLE3O43900 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PRICKLE3O43900 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PRICKLE3O43900 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.72□□□□□ -0.05
PRICKLE3O43900 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PRICKLE3O43900 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PRICKLE3O43900 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PRICKLE3O43900 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms