Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 KRT18P43-201ENST00000469825 1281 ntBASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 AL844908.2-201ENST00000609461 460 ntBASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 MIR600HG-201ENST00000449175 5984 ntBASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCDHGA11Q9Y5H2 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 AC126755.1-201ENST00000525846 6405 ntBASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 IGHV3-42-201ENST00000520410 361 ntBASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 TIMM17BP1-201ENST00000545713 516 ntBASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 AC044860.1-202ENST00000559481 777 ntBASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 RN7SL121P-201ENST00000584223 273 ntBASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 BTBD7P1-201ENST00000447253 1453 ntBASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDHGA11Q9Y5H2 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 AL161772.1-201ENST00000610494 4412 ntBASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.98□□□□□ -0.01
PCDHGA11Q9Y5H2 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms